Antechinus flavipes (yellow-footed antechinus): 127538926
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Entry
127538926 CDS
T08818
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127538926
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
127538926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
127538926
NCBI-ProteinID:
XP_051818736
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Position
5:complement(234904812..234977679)
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AA seq
1042 aa
AA seq
DB search
MVLLSSFSLCSHLPSGHSEESKVGNMKSAKQQINHSQCGESLTPLSPLRSALNSVVTSSQ
AYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEPLNSDQLEAVEKYEEVLHNLEF
AKELQKTFSGLSHDLLKAQKKAQRREHMIKLEAEKKKLRTIFQVQYVLQNFTQEHVLEDF
KGGLNGAMYLPSRELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGT
TYKHMKDLLSKLLTSGYFESIPVPRNIIKQKKELNEEIRGKSEKKQLLQTESTKESEPLM
EHTQPEIQPQEFLNRHYLSEVEYSSKKPEGQLSWEEDYTRKPNLTKCWEGQKKLESLMSW
DSVKQQETAKPILTPEDNQKSPKSTTIDLEQKKKEISKSNIVHGTWEQDIPKSNSVCGQE
EQKKQESLKPWVAAVQKELEPKKQTPKSWTPSTQEIRSWPTSTHEEQDKKSSEIPEPWEA
NVESQKQALLQKLHSPSKSWGSPATNTVVNGQLMTRKYDSESKDVPKLLNPSKDTPFVPP
NDSILRKEKLQDLMTQIQGTYNFMQESVLDFDKPSSALPSPQLPSVIPDSPEASVEQKLS
NQNDFLQEPLQAATSFVKNNTSSLVITDQASSGSEMELETHQAAIPLSKQRTSLSSADPP
MSQGSQDQVFQSPPASSSMVFNVNAPLPPRKEQEIKDSPYSSRYNQSYTTASTQTAPQCQ
LSSTHVEQTTLSQDQTANNQPDGSIQVSSGSLAFYPAQTNVFPRSTQPYLSNRSSIKGCV
RSGRSLINSFRSPGGYKGFDTYRGSPIIANGSYSQLQFQAREYPGTPYSQKDTNFQPCYK
RGGLSGGSCTSLRAGWSDSSQVNSPERENETFNSVDSGQGDSRSMTPVDVPVTSPAATIL
PIHIYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTY
VFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLH
RGAIYGSSWKYSTFSGYLLYQD
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctttcttcgttctctttatgtagccacttaccttcaggccattcagaggag
agcaaagtggggaatatgaaatcagccaagcagcaaataaatcacagccaatgtggggag
agcctgactcccctaagtcccctgcgatctgctctgaattcagtggtaacttcttcccag
gcctatgagacctacattgataatggactcatatgtctcaaacacaagattaggaatatt
gaaaaaaagaagctcaaattagaagattataaggatcgcttgaaaaatggagagccactc
aattcagatcagttggaagcagtagaaaagtatgaagaagtattacataacttggaattt
gccaaggagcttcaaaaaactttttctggactcagccacgatctcctgaaagcccagaag
aaggctcagagaagagagcacatgataaaacttgaggctgagaaaaagaagctccggact
atatttcaagttcagtatgtcttgcagaactttacacaagaacatgtactagaggacttc
aaaggtggcttgaatggtgcaatgtatttgccttcaagagaactagactacctcattaag
ttttcaaagctcacatgccctgagagaaacgagagtctgagtgttgaagaccagatggaa
cagtcatcactctacttctgggacctcttagaaggtagtgagaaagcagtagtaggaaca
acatataaacatatgaaggatctgttgtctaaactgctgacctctggctattttgaaagt
attccagttccccgaaacattataaaacaaaaaaaagaattgaatgaagaaatccgagga
aaatcagagaagaaacagttattacagacagaatctactaaagaatcagaacctcttatg
gaacatacacagcctgagatacagccacaagagtttctcaacagacattatctgtctgaa
gttgagtattcaagcaagaaaccagaaggtcagctgtcttgggaagaagattataccagg
aagccaaatcttacaaaatgttgggaaggccagaagaagctagagtctctgatgtcttgg
gattctgttaagcaacaggagactgcaaaacctattttaactccagaagataatcaaaag
agtccaaaatctactactattgatcttgaacagaagaagaaagaaatttctaaatccaac
atagttcatgggacatgggagcaagacatacccaaatctaattcagtctgtggtcaagag
gaacagaagaaacaagagtccttaaagccttgggttgctgctgtgcaaaaagaattggag
ccaaagaaacagactcccaaatcttggactccttctactcaggagattaggtcttggcca
acttcaactcatgaagaacaagataaaaagtcatctgaaattccagagccctgggaagcc
aatgttgagagccagaaacaggctttgctgcaaaagttacactctccttccaagtcctgg
ggatctccagcaacaaatactgtagtgaatgggcagttgatgaccaggaagtatgattca
gaatccaaagatgtacctaagcttttgaatccgtccaaagataccccttttgtccctcca
aatgattcaattctaaggaaagaaaagcttcaggatctgatgactcagattcagggaact
tataattttatgcaggaatcagttttggattttgacaagccttcaagtgcacttccttca
ccacaactgccttcagttattccagatagtcctgaagcttctgtagaacagaaactatcc
aaccaaaatgactttcttcaagagccattacaagctgctacttcttttgttaagaataat
accagttctttagtgattactgatcaagcttcttctggatctgaaatggagctagagact
catcaggcagcaattcctctaagtaagcagcgaacttcactatcttctgcagatcctcct
atgtcacaaggttcccaggatcaggtcttccagtcacctccagcaagcagcagtatggta
ttcaatgtgaatgcacctttgcctccacggaaagaacaagagataaaagactcaccttat
tcaagtagatataatcagagttatactacagcaagtacacagacagcaccccagtgccaa
ttgtcatctacacatgtggaacaaactactctctctcaagatcagactgcaaacaatcaa
cctgatggatcaattcaagtaagcagtggtagccttgccttttatcctgcacagactaat
gtgttccccagatctacccaaccatatcttagtaatcgaagttccattaaaggatgtgtt
cgtagtgggagatcactgataaattcctttcgctcccctggtgggtataaaggttttgat
acttacagaggatcccctattattgccaatggcagttatagtcagctgcagttccaagct
agagaatatcctggcacaccatattcccaaaaggatactaattttcagccatgttataaa
cgaggaggactttctggtggttcttgtacaagtttgagagcagggtggagtgattcttct
caggtgaacagtccagaacgagaaaatgaaaccttcaacagtgttgactctggacaagga
gactctcggagcatgacccctgtggatgtgccagtgacaagtccagcagccaccatattg
ccaatacacatatatcctctcccccagcagatgagagttgccttttcagcagccagaacc
tctaacttggctcctggaactttggaccagcctattgtgtttgatcttcttctgaacaac
ttgggagaaacttttgaccttcagcttggtagatttaattgtccagtgaatggtacttac
gttttcatctttcacatgttaaagctggcagtgaatgttccattatatgtcaatctgatg
aagaatgaagaagttttagtatcagcttatgctaacgatggtgctccagatcatgaaact
gctagtaatcatgcaattcttcagctatttcagggagaccagatatggttacgtttgcat
aggggagcaatttatggaagcagttggaagtattctactttttcaggatatctcctttat
caggactga
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