Antechinus flavipes (yellow-footed antechinus): 127538992
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Entry
127538992 CDS
T08818
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03013
Nucleocytoplasmic transport
afz05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127538992
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127538992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127538992
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127538992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
127538992
NCBI-ProteinID:
XP_051818856
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All DBs
Position
5:complement(295925482..295940007)
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AA seq
475 aa
AA seq
DB search
MAKRIAEKELTDRNWDQEDDAEEVGTFSVASEEVLKNRAIKKAKRRAAVPECESGGAFKG
FKGLVLPPGGGGGLSGFGNGTSIKTLEGLSNGSSMASMPTLALAKAAVEKKVAFGRGTIN
GPTASLGADKKATDLKTNGDSQQPSSSSSHSAQGKACSASAYHRQLAALNCSVRDWIVKH
VDTNPLCDLTPIFKDYERYLTSIEQMPGNSSDGSSEREAGRQPFGTVPGPPVLGPSQKAQ
DSPFLFHPDKAEGAAEKRTEASVEKKLAPALAAASAASFHFGRKVDSSALGPLGSGPMAN
FSFSPGNAGIFGKDVTQASPVSSFSPKMPEGHTDATAGDSKGAEEEESEEPPKVIVTEVK
EEDAFYSKKCKLFYKKDNEFKEKGVGTLHLKPAANQKTQLLVRADTNLGNILLNVLVPPN
MPCSRTGKNNVLIVCVPNPPINEKSATVPVTMLIRVKTTEDADELHKILQEKKEV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaggatcgcggagaaggagctgacagaccggaactgggaccaggaggatgac
gcggaggaggtgggcacgttctcggtggcgagcgaggaagtcttgaagaacagagccatc
aagaaggcgaagcgcagggccgcggtccccgaatgtgaaagcggaggagcttttaaaggg
ttcaaaggcttggtcttacctccgggaggaggaggagggctctctggcttcggcaacggc
accagcatcaagactctggaaggcctgtccaatggcagcagcatggcttctatgcccacg
ctggccctcgccaaggccgcagtagaaaagaaggtggcctttggccgtggcacaatcaac
ggcccgacggcttccttgggggcagacaagaaggccactgacctcaaaaccaacggggac
agccagcagccttcctcgtcctccagccacagcgcccagggcaaggcctgtagcgccagt
gcctaccaccgacagctcgccgccttaaactgctccgtgcgcgactggatcgtcaagcac
gtggacaccaaccccctctgcgacctgacgcccatcttcaaagactacgagagatacctc
acgagcatcgagcagatgcccggcaacagcagcgacggcagctcagagagagaagccggc
cggcagccgttcgggactgtgcctgggccccctgtcctggggccgtcccagaaagcccaa
gactccccctttctgtttcacccagacaaagccgagggggcagcggagaagcggaccgaa
gcgtcggtggagaagaaactggccccggccctggcggcggcatctgccgcctcctttcac
tttggccggaaggtcgacagctcagccctgggccccctgggctctggcccaatggcaaac
ttctccttctctccgggaaatgcaggcatttttggcaaagacgtgactcaggcgagccct
gtctcctccttctcccccaaaatgccagagggccacacagatgcaactgctggcgacagc
aaaggtgctgaagaggaagagagtgaagagccccccaaagtgatcgtgacagaagtcaaa
gaggaggatgctttttactccaagaagtgcaaactcttttacaaaaaagataatgagttc
aaagagaagggtgtgggcacactgcacttgaaacctgccgccaatcagaagacccaactt
ctggttcgagctgacaccaatttaggtaacatactcctgaatgtcctggttccgcccaac
atgccctgctcccgaactggcaagaacaacgttctcattgtctgtgtccccaaccctccc
atcaacgagaagagcgccactgtccccgtgacgatgctcatccgggtcaagaccaccgag
gacgccgacgaactgcacaaaatcttgcaggagaagaaggaagtgtga
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