Antechinus flavipes (yellow-footed antechinus): 127539062
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Entry
127539062 CDS
T08818
Name
(RefSeq) acid-sensing ion channel 1 isoform X1
KO
K04829
acid-sensing ion channel 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
127539062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afz04040
]
127539062
Ion channels [BR:
afz04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
127539062
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Gene cluster
GFIT
Motif
Pfam:
ASC
FAM176
CbtA
EFP
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
127539062
NCBI-ProteinID:
XP_051819002
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Position
5:complement(227983312..228017918)
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AA seq
645 aa
AA seq
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MSERLCLFPSSAPHYLSPFLPPSLLPLLRHSPLRVQAQAAGLLWGHAGWHFLLAHPWASY
PLLFLLLPFPPSILSVPGSSSLSLDLPKMPIQIFCSLSFSSGEDSGAVRDSWGPNQKQQE
KSESESEEEEEEEEEKEAKEEEESLAIDLVAFANSCTLHGASHVFVSGGLGPRQALWAMA
FALALGTFLYQVGDRVTYYRSYPHVTLLDEVSTSELAFPAVTFCNTNAVRLSQLSYPDLL
YLAPLLGLEDGEDPGVPLAPPGPDAFSGEPFNLHRFYNRSCHRLEDMLLYCSYRGGPCGP
HNFSVVFTRYGKCYTFNAGQDGRPLLKTMKGGTGNGLEIMLDIQQDEYLPVWGETDETSF
EAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVACQEQRLIYLPPPWGTCKAVTMDSDFFD
SYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDQDYCVC
EMPCNLTRYGKELSMVKIPSKASAKYLAKKFNKSEQYIGENILVLDIFFEVLNYETIEQK
KAYEIAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHKLCRRGRCQKESKRNSADKG
VALSLDDVKRHNPCESLRGHPAGMTYAANILPHHPTRGTFEDFTC
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacggctctgcctctttcccagctccgccccacattacctctctcccttcctt
cctccctccctccttcctctcctgagacactccccactaagggttcaggcacaggcagcc
ggattgctttgggggcatgctggctggcatttcctattagcccacccttgggcatcttac
ccccttctcttcttgctcctcccctttcctccttccatcctttcagtcccagggtcatca
tctctctcccttgatctcccaaagatgcccatccagattttctgctctctgtctttttcc
tctggtgaggactcaggggctgtaagggacagctggggccctaaccaaaagcagcaagag
aagtctgaatctgaatcagaagaggaagaagaggaggaggaagagaaggaagcaaaggag
gaagaggaaagcttagctatagacttggtggcctttgccaacagctgtactctccatggg
gccagccatgtttttgtgtcaggaggcttagggccacgccaagcgttatgggctatggcc
tttgccctggcactgggtacctttttgtaccaggtaggagatcgggtgacctactaccga
agctatccacatgtgacactgctggatgaggtgtccacttctgagctggcctttccagcc
gttactttttgcaacaccaatgccgtgcggctgtcccagctcagctatcctgacctgctc
tacctggccccactgctcgggctggaggatggggaagaccctggtgtgccccttgctccc
ccaggccctgatgcattctctggggagcccttcaacttgcaccgtttctacaatcgctcc
tgccaccggctggaggacatgctgctgtactgctcctatcgagggggcccctgtggccct
cacaacttttctgtggtctttacacgctatggaaaatgctacacattcaacgcaggccag
gatgggcggccactgctcaagactatgaagggtgggacaggcaacgggctagagataatg
ctggacatacaacaggatgagtacttgccggtctggggagagacggatgaaacttccttt
gaggctgggatcaaggtgcagatccacagtcaggatgagccacctttcattgaccagcta
ggctttggtgtagctcctgggttccagacctttgtggcttgccaggagcaacggctcatc
tacctgcctccaccctggggtacttgtaaagctgttaccatggactccgatttcttcgac
tcatacagcatcacagcctgtcgaattgattgtgaaacacgttatctagtggaaaactgc
aattgccgcatggtgcacatgccaggtgatgccccatactgcactcctgagcaatataag
gagtgtgcagaccctgctctggatttcctagtggagaaggaccaggattactgtgtgtgt
gaaatgccctgtaacctgactcgctatggaaaggagctgtccatggtcaagattcccagc
aaagcctcagccaagtatctggccaaaaagttcaacaagtcggagcagtacattggggag
aacatcctggtgctggacatcttttttgaagtcttgaactatgagaccattgaacaaaaa
aaagcttatgagattgcaggactcctgggtgacattggaggtcaaatgggattgttcatt
ggagcaagcattctcactgttctggagctcttcgactatgcttatgaggtgattaagcac
aagctgtgccgtcggggcaggtgccagaaagagtctaaaaggaacagtgcagacaagggt
gtagccctcagtctggatgatgtcaagcgacataacccctgtgagagcctccggggccat
cctgctgggatgacatatgccgccaacatcctacctcaccatccaaccagaggcaccttt
gaggactttacctgttga
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