Antechinus flavipes (yellow-footed antechinus): 127539258
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Entry
127539258 CDS
T08818
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04612
Antigen processing and presentation
afz05145
Toxoplasmosis
afz05152
Tuberculosis
afz05164
Influenza A
afz05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
127539258
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
127539258
09171 Infectious disease: bacterial
05152 Tuberculosis
127539258
09174 Infectious disease: parasitic
05145 Toxoplasmosis
127539258
09163 Immune disease
05340 Primary immunodeficiency
127539258
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
afz01001
]
127539258
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
afz04054
]
127539258
Enzymes [BR:
afz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
127539258
Protein kinases [BR:
afz01001
]
Serine/threonine kinases: Other
TAF1 family
127539258
Pattern recognition receptors [BR:
afz04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127539258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_Zer-1
NB-ARC
LRR_9
Motif
Other DBs
NCBI-GeneID:
127539258
NCBI-ProteinID:
XP_051819321
LinkDB
All DBs
Position
1:complement(300352457..300408666)
Genome browser
AA seq
1092 aa
AA seq
DB search
MRQLRGTDQCAAMESGPLTEGSYMGLLQSDVDPLHLFHFYDQPLATEEEIEFSLDPETDT
INCDQVNRLWNAIDDEGTGEAYDRIAALAEYMFSETEGIFGNIGPDEVINENLDSLTEIP
QKSQKCQKRLFLDNPEPQADNWETKRRKPETSSATPLVTNNLVTVSSSNNLVPKSSLSPI
ADQVAKPSLLSLEETFLVPMSSASPVLTCLNFNGGPIQLIPTFSTFPQGVLHFTVENKVS
NIILYPTASGSDSTIQSLPVSPDRYGSTSPFAPSAADMPNMPEASALTSQDRKTESVERF
SHALYKAYEDVPEGLNRHYIDVDLIRTQVEKNGKFQEKELAIQDWTERQKARVGWREVFA
SPRGQKRETQVIAVLGKAGLGKSAWTREVCRNWAQGQLPQYEFVFHYKCCSLNLPGNDYC
LKDLFFRLCNHSLEESEEIFKYILKHPNRTLIILDSFEELEGQDGFLNYPASPCPGESRP
IKGLLAGLFQRKLLRGCTLLITARPKGKFIQYLAKVDRLLEVQGFSNEQVESYFEKYFQD
SPSDKDEALRLVRAQPYLLSHCYSPAVCHSLCQLCEKIMAQEGPAQLPSTLTGLFVSLLC
SVLRAREKGPSETWSRDCLAGLAELAWELGQKHCNVLREDQFPSTEVKEFAIRGDFVWPL
PTAREPEMAFSTFVLQNFLGALRLALSEEVRAKELPRYLALTPRKKKPYDNWLERVPHFL
AGLLFQPLSSCLGPLGGNEQVGLVCKRQKVLLSYLTQLQPGTLGPGRLLELLHCAHEATD
SHLWQHVTAGLPSCLSFCRVRLAPPDVHVLGEALKAAGKDFSLDLRSTSIDLQGLRILVQ
LGCVTCFRASLSDTVWLWESLRQSGEYELLRSSTEKFTIDPFKVKSMKDVEDLCSLVHIQ
NSGNAAIEAGNPLPVIRDLKKLEFALGPVLGPQGFPKLVKILAAFSSLQHLDLDTLSENK
IGDEGVAQLSAIFPELKSLETLNLSQNNITDMGATELAKALPSLARSLVTLSLYNNCICD
TGAENLASVLPDMVSLRMLDVQYNKFTGAGAQQLTASLKKCPHIETLAMWNPTIPYGVQE
HLQQLDSRISLR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagttacgtggtactgatcagtgtgcagccatggaatctgggccattgacagaa
ggaagctacatggggctactacaaagcgatgttgaccccctacatcttttccatttttat
gaccaacccctggcaacagaagaagaaattgagttctctttagatcctgaaactgataca
atcaactgtgatcaggtcaacaggctgtggaatgccatagatgatgaggggacaggagag
gcctatgacaggatagcggcactggcagaatatatgttctcagagacagaaggcattttt
ggaaacattggcccagatgaagtgatcaacgagaacttagattcattgactgagatacca
cagaaatcacagaaatgtcagaaaagattgtttctggataatcctgagcctcaggcagac
aattgggagaccaaacgcagaaagccagagacatcctcagctactccattggtgaccaac
aatttagtgacagtgtcttctagcaacaacttggtcccaaagagttctttgtctcctatt
gcagaccaggttgccaagcccagcctgctctctttagaagaaacctttctggtgcccatg
tcctcagctagtcctgttctcacttgcctgaatttcaacgggggacccatccaactcatc
cccaccttctctacttttcctcaaggtgtcttacacttcacagtggaaaacaaggtctcc
aacattatcttatatccaactgcatcaggaagtgatagcaccattcagagccttccagta
tcacctgacaggtatggctctaccagtccttttgctccatcagcagcagatatgcccaat
atgcctgaagcctcagcgctaacttcacaagacagaaaaacagagtctgtggaacggttc
tctcacgctctgtacaaggcttatgaggatgttccagaaggtctcaacagacattacatt
gatgtagacctcataagaactcaggtggagaaaaatggtaagttccaggagaaggaactg
gcaatccaggactggacagagaggcagaaggcccgtgtgggatggagagaggtgtttgcc
agccccagaggacagaagagggaaacgcaggtgatcgcagtactgggcaaggctggtctg
ggcaaaagtgcctggactcgggaagtctgtaggaactgggcccagggccagctaccccag
tatgaatttgtctttcactacaaatgctgcagcctgaacttgccaggcaatgactactgc
ttgaaggatctgtttttcagactctgtaatcactcactggaagagagtgaggaaatcttc
aaatacattttgaagcacccaaatcgcactttgatcattctggattcctttgaggagctg
gaagggcaagatggctttctgaattatccagccagtccctgtcctggggagtcccggccc
atcaaggggctgctggctggtctctttcaaagaaagctcctgaggggttgcaccctgctg
attacagccaggccgaagggaaaatttattcagtacctggccaaggtagacaggctcctg
gaggtgcagggcttctccaatgagcaggtggagtcttactttgaaaaatacttccaggat
tcaccatcagacaaagatgaggccttgaggcttgtccgggcccagccgtacctgctcagt
cactgctacagccctgctgtctgccattccctctgccagctttgtgagaagatcatggcc
caggagggtccagcccaacttccctccacactcactggtctctttgttagcctcctttgc
tcagtcctgagagccagggaaaaggggccatctgaaacttggtccagagactgcctggca
ggcttggcagagctggcctgggaactaggccagaaacattgcaacgtcctgagagaagac
cagttcccctccacagaagtgaaggaatttgccattaggggggactttgtgtggccactc
ccaacagccagagaaccggagatggccttctccacctttgtcctgcagaacttcctggga
gctctgaggctggctctcagtgaggaagtaagggccaaggagctccccaggtatctagct
ctgactcctaggaagaaaaagccctatgacaattggctggagcgggtacctcacttcttg
gccgggctcctcttccaacccctatcctcctgccttggacctcttggtggaaatgagcag
gttgggcttgtgtgcaagaggcagaaggtacttttgagctacctgacccagctacagccg
gggacactggggcccgggagactcctcgaactgctgcattgtgcccatgaggcaaccgac
agccacctgtggcagcacgtaacagctgggctgccctcctgcctctctttctgcagagtc
cgcctggcccccccagatgtgcatgttttgggtgaggccctgaaagcagctggcaaagac
ttctctctggatctcaggagcacctccattgacctgcaagggttaaggatcctggtccaa
cttggttgtgttacttgcttcagggcatctctgagtgacacagtgtggctgtgggaatcc
cttcggcaaagtggagaatatgaactactccgaagttccactgagaagttcaccattgat
cctttcaaagtcaaatccatgaaggatgtagaggacctttgtagcctggtgcatatccaa
aattcaggaaatgctgctatagaggccggtaacccccttcctgtcatcagagacctaaag
aagcttgagtttgcacttggcccagtgttgggtccccagggttttccaaaattggttaag
atacttgcagctttttcatctcttcagcatttggacctggacaccctgagtgaaaacaag
attggggatgaaggtgtggctcagctctctgccatctttccagagctaaaatctttggaa
accctgaacttatctcagaataacatcactgatatgggagccacagagctggccaaggct
ctgccatcactggcaagatctcttgttacattgagcttgtataacaactgcatctgtgat
actggagccgagaatcttgctagcgtgcttcccgacatggtatccctgagaatgctggat
gtccagtacaacaagttcacaggggcaggagcacaacagctcacagccagtttgaagaaa
tgtccacatattgagacattggcgatgtggaatcccaccattccttatggagttcaggaa
catctacaacaactggactcccgaataagcttgagataa
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