Antechinus flavipes (yellow-footed antechinus): 127539823
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Entry
127539823 CDS
T08818
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03420
Nucleotide excision repair
afz04120
Ubiquitin mediated proteolysis
afz05161
Hepatitis B
afz05170
Human immunodeficiency virus 1 infection
afz05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127539823
09124 Replication and repair
03420 Nucleotide excision repair
127539823
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
127539823
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
127539823
05161 Hepatitis B
127539823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afz04121
]
127539823
03400 DNA repair and recombination proteins [BR:
afz03400
]
127539823
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
127539823
DNA repair and recombination proteins [BR:
afz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
127539823
TCR (transcription coupled repair) factors
Cul4-CSA complex
127539823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Beta_propel
Motif
Other DBs
NCBI-GeneID:
127539823
NCBI-ProteinID:
XP_051820156
LinkDB
All DBs
Position
6:complement(252772575..252802092)
Genome browser
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELQVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSGRE
TDDTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLSIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaactacgtggtgacggcgcagaagcccacggccgtcaacggctgcgtgacg
ggtcacttcacttctgccgaagacttgaatctgctgattgccaaaaacacccgcctggag
atctatgtggtcaccgcagaggggctgcggcccgttaaggaagtgggcatgtatggcaag
attgctgttatggagcttttccgtcccaagggagagagtaaggacctgctctttatcttg
acggccaaatacaacgcctgcatcctggagtataagcagagtggggagagcatcgacatc
atcacccgagctcatggcaatgtccaggatcgcatcggtcgtccttccgagactgggatc
atcggcatcattgaccccgagtgccggatgatcggcctgcgcctgtatgatggcctcttt
aaggttatccccctggaccgggacaacaaagaattgaaagccttcaacattcgtctggag
gagctccaggtcatcgatgtcaagttcctctacggttgccaggcccccaccatctgcttt
gtctaccaggacccccagggacggcatgtcaagacctatgaagtatctcttcgagagaag
gaattcaataaaggcccttggaagcaggaaaatgtggaggcggaagcttcaatggtgatt
gcagtcccagagccttttggaggtgcaatcattattggccaagaatccatcacctatcac
aatggcgataagtacctggccattgcccctcccatcattaagcaaagcacaattgtgtgc
cacaatcgagtagatccaaatggttcccgttacctgctcggagacatggaaggtcggctc
ttcatgctgctgctggagaaagaggagcagatggacggcacggtgacccttaaggatctt
cgtgtggagcttctcggagagacctccattgccgaatgcttgacgtacctggacaacggg
gtcgtgtttgttggctcccgccttggcgactctcagcttgtaaagctcaacgtggacagc
aacgagcaaggctcttacgttgtggccatggaaacctttaccaatttgggtcccattgtg
gacatgtgtgtggtggatctggagagacagggccagggccagctggtcacatgttctgga
gcttttaaggaaggctccttgcgtatcatccgaaacgggatcggaatccacgagcatgcc
agcatcgacctgcctggtatcaaaggcttatggcctctcaggtctgactctggccgagaa
accgatgacaccttggtgctgtcctttgtgggccagacgagagttctgatgttgaatgga
gaggaggtggaggaaacggagctgacggggtttgtggatgaccagcagactttcttctgt
gggaatgtggcccatcagcagctgatccagatcacctctgcctccgtgcggctcgtgagc
caggagcccaaggccttagtgagcgagtggaaggagccgcagggcaagaacatcagcgtg
gcctcgtgcaacagcagccaggtggtggtggccgtgggcagggccctctactacctgcag
attcatcctcaggagctccggcagataagccacacagagatggagcacgaggtggcctgc
ttggacatcaccccgctgggggacagcaacggcatgtccccgctctgtgccatcggcctc
tggaccgacatctcggcccgcatcctgaagcttccctcgttcgagctgctgcacaaggag
atgctcgggggagagatcatccctcggtccatcctgatgaccacctttgagagcagccac
tacctcctctgcgccctgggagacggcgccctcttctacttcgggctcagcatcgagaca
ggcttgttgagcgaccggaagaaggtgactcttgggacgcagcccacggtcctgaggacg
tttcgctcgctctccaccaccaacgtcttcgcgtgctccgaccgccccaccgtcatctac
agcagcaaccacaagttagtcttctccaacgtcaacctcaaggaggtcaactacatgtgt
cccctcaactcggacggctaccccgacagcctggccttggccaacaacagcaccctcacc
atcggtaccatcgacgaaattcagaagctgcacatccgcacggtgcccctgtacgaatct
ccaagaaagatttgctaccaggaagtgtcccagtgctttggggtcctctccagtcggatt
gaggtgcaggacgccagcggagggacgacggccctgcgacccagtgccagcacgcaggcc
ttgtccagcagcgtcagctccagcaagctgttctccagcagcacggcccctcacgagacg
tcctttggagaagaggtcgaggtgcacaacctgctcatcatcgatcagcacacctttgaa
gtgctccatgcccaccagttcctccagaacgagtatgctctcagcctggtctcctgcaag
cttggcaaagatcccaacacctacttcatcgtgggcactgccatggtctatcccgaagag
gccgagcccaagcagggtcgcattgtcgtgttccagtactcggacggcaaacttcagact
gtagctgagaaggaagtcaaaggtgctgtgtactccatggtggagttcaacgggaagctc
ttagccagcatcaacagcacggtgcgactttacgagtggactgcagagaaagagctcagg
accgagtgcaatcactacaacaacatcatggccttgtacctgaagaccaagggcgatttc
attctggtcggtgacttgatgcgctccgtgctgctcctggcctacaagcccatggagggc
aactttgaagagattgcccgggactttaaccccaactggatgagtgccgtcgaaatctta
gatgacgacaacttcctgggggccgagaacgcttttaacttgtttgtgtgtcagaaggac
agcgctgccaccactgacgaggagcggcagcatctgcaggaggtggggctcttccacctg
ggcgagtttgtcaacgtcttctgccacggctccctggtgatgcagaacctcggggagacc
tccacccccacgcagggctccgtgctcttcggcaccgtcaacggcatgatcggtctggtg
acctccctgtcagaaagctggtacaatctcctcctggacatgcagaaccgactcaacaaa
gtcatcaaaagcgtcggcaagatcgagcattccttctggagatcgtttcataccgaacgc
aagacagagccagctacgggtttcattgatggagatctgattgaaagtttcctggatatc
agccggcccaagatgcaggaagtcgtggctaacttacagtatgatgatggcagcggaatg
aagcgagaagccaccgcagatgacctgatcaaggttgtggaggagctgactcggatccat
tag
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integrated database retrieval system
