Antechinus flavipes (yellow-footed antechinus): 127539865
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Entry
127539865 CDS
T08818
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03018
RNA degradation
afz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127539865
09123 Folding, sorting and degradation
03018 RNA degradation
127539865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127539865
03041 Spliceosome [BR:
afz03041
]
127539865
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127539865
mRNA degradation factors
5'-3' decay
Lsm complex
127539865
Spliceosome [BR:
afz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127539865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
127539865
NCBI-ProteinID:
XP_051820228
LinkDB
All DBs
Position
6
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AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY
GDAFIRGNNVLYISTQKRRM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcggaaacaaactcccagtgatttcctaaagcagatcataggaagacctgtt
gtagtaaagctaaattcgggagttgattatagaggtgtcctggcttgcctggatggctac
atgaatatagctctggaacaaacagaagaatatgtaaatggacaactaaagaataagtat
ggggatgcatttattcgtggaaataatgtgttatatataagtacacagaagagaagaatg
tga
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