Antechinus flavipes (yellow-footed antechinus): 127539875
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Entry
127539875 CDS
T08818
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127539875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127539875
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127539875
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
127539875
NCBI-ProteinID:
XP_051820240
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Position
6:38009991..38089412
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AA seq
584 aa
AA seq
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MSAGEVERLVSELSGGTGGDEEEEWLYGDENEVERPEEENASANPPSGIEDETAENGISK
PKVTETEDDSESDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLNIKTGGRVYGAAGTK
VKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRI
RMGLELIPNKITAEDYTMEVTPGAEIQDGRYNLFKVQQGRTGNAEKETVLQSAKAEFTSP
PSLFKTGLPPSRNSASSQSQTSSASRKANSGIGKWQDRYGRAESPDLRRLSGTIDVIGQT
ITISRVEGRRRANENSNIQVLSERSAAEVDNNFSKPPPFFPPGAPPTHLPPPPFLPPPPT
VSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYGNVAF
PHLPGSAPSWPSLVDTTKQWDYYARREKDRERERERDRERDRDRDRERERTRERERERDH
SPTPSVFNSDEEQRYRYREYTERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRR
RHESEEGDSHRRHKHKKSKRSKEGKEAGNEPAPEQESTEATPAE
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggggaggtggagcggctggtgtcggagctgagcggcggcaccggcggggat
gaggaggaagagtggctctatggcgatgaaaatgaagttgaaaggccagaagaagaaaat
gccagtgctaatcctccatctggaattgaagatgaaactgcagaaaatgggatatcaaaa
ccaaaggtgactgaaactgaagatgatagtgagagtgacagtgatgatgatgaagatgat
gttcatgttaccattggtgatattaaaactggagcacctcagtatgggagctatggtaca
gcacctgtaaatcttaatatcaagacaggaggaagagtttatggagctgcagggacaaaa
gtcaaaggtgtagaccttgatgcacctggaagcattaatggagttccactattagaagta
gatttagattcttttgaagataaaccatggcggaaaccaggtgctgatctttctgattac
tttaattatggttttaatgaagatacatggaaagcttactgtgaaaaacaaaagaggata
cgaatgggacttgaattaataccaaataaaattacggccgaagactatactatggaagtt
acaccaggtgcagagatccaagatggcagatacaatctttttaaggtacagcagggcaga
actggaaatgcagagaaggagacagtgctacagtctgccaaagctgaatttacatctcct
ccttctctattcaaaacaggacttcctccaagcagaaacagcgcctcttctcagtctcag
acaagttctgcctccagaaaagccaattcaggcatcgggaagtggcaggatcgatatggg
agggccgaatcacctgacttaaggagattatctggcacaatagatgtcattgggcagact
atcactattagccgggtagaaggaagaaggcgtgcaaatgaaaatagcaacatccaggtt
ctttccgaacgatctgctgctgaagtagacaacaattttagcaaaccacctccatttttc
cctccaggagctcctcctactcatctcccaccacctccatttcttcctcctcctccaact
gtcagcactgctccacctcttattccccccccaggtattccaataactgtaccacctcca
ggttttcctcctcccccaggagctcctcctccatctcttataccaacaatagaaagtgga
cattcttctggatatgatagtcgttctgctcgggcatttccatacggcaatgttgctttt
cctcatcttcctggttctgctccttcatggcctagtcttgttgacaccaccaagcagtgg
gactactatgccaggagagagaaagatcgagagcgagagagagaacgagaccgagagaga
gatcgtgatcgtgatagggaaagagaacggaccagagagagagagcgagaacgtgatcac
agcccaacaccaagtgtattcaacagtgatgaagaacaacgatacagatacagagaatac
acagaaagaggctatgagcgtcacagagcaagtcgagaaaaagaagaacggcacagggaa
aggagacacagggaaaaagaggagacgagacacaagtcttctcgaagtaatagcagacga
cgccatgaaagtgaagaaggggacagtcacaggagacataaacacaaaaaatcaaaaaga
agcaaagaaggaaaggaagctggtaatgaacctgcccctgagcaggagagcactgaggcc
acccctgctgagtaa
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