Antechinus flavipes (yellow-footed antechinus): 127540021
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Entry
127540021 CDS
T08818
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04120
Ubiquitin mediated proteolysis
afz04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127540021
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127540021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afz04121
]
127540021
Enzymes [BR:
afz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127540021
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127540021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
127540021
NCBI-ProteinID:
XP_051820504
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Position
1:complement(308828556..308929705)
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AA seq
580 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFATHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEENEKPRVMYSL
EFTFDADARVAITIYCQAVEEFMNGMAVYSTKNPSLQSETVHYKRGVSQQFSLPSFKIDF
SEWKDDELNFDLDRGVFPVVIQAIVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQK
QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCN
SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSMDHDEHSCPFKK
SKSNPVSLASKKPKRETNSDNIPPGYEPISLLEALNGLRSISPAIPSAPLYEEITYSGVS
DGLSQAGCPLAGLDRALESSLQKNKPNKSPDSTLRSPSSPIHEEDEEKLSEDSDSPPPLS
GAELALRESSSPESFITEEIEEVPSLKQESQAPSIEDVLQDSSTEHRSLNQPGIDPPADI
YLPGSSASMETPQSHSVNGSTRPPVCDPSPEYREAELTSL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatcctaagccgccggatcgccggggtggaggacatcgacattcaggcgaac
tcggcctatcggtaccctcccaagtccggaaactattttgccacccactttttcatggga
ggtgagaaattcgacacccctcaccctgagggttacctctttggagagaacatggatctg
aacttcctaggcaacagaccagtacagtttccctatgtgactcctgctccccatgaacct
gtgaagaccctaagaagcttggtgaatattcgcaaagactccttacgacttgtgaggtac
aaagatgatgctgacagcccaacagaagagaatgagaagccaagagtcatgtatagcttg
gagttcacttttgatgctgatgcacgagtggctatcacaatatattgccaggcagtggag
gagttcatgaatgggatggcagtatacagcacaaagaatccttctttgcagtccgagacg
gtccattataagagaggggtgagccagcaattttcccttccttccttcaagattgatttc
tcagaatggaaagatgatgagttgaactttgatctggaccggggtgtattcccagtagtg
atccaagctattgtagatgaaggagatgttgtggaagtgactggtcatgcccatgtatta
ttagctgcttttgagaagcatgttgatggcagcttctctgtgaaacctttaaaacagaag
cagattgtggatcgagttagctacctcctccaggaaatctatggtattgagaacaaaaac
aaccaggaaactaagccctctgatgatgagaacagcgataacagcaacgaatgtgttgtg
tgtctatctgatctgcgagacaccctgatccttccctgccgacacctttgcctttgtaac
tcatgtgctgatactctacgctatcaagcaaataattgtcccatctgcaggctacctttt
cgggccctcctacagatccgggcagtgaggaagaagccaggagcactgtcccctgtctca
ttcagtcctgttttagcacagagcatggatcacgatgaacactcttgtccctttaaaaaa
tcaaagtcgaaccctgtctctttggccagcaagaaacctaaaagggaaacaaactctgac
aacatcccacctggatatgaacccatctctttgctggaagctctgaatggccttcgctcc
atctctcctgctattccttcagctcctctttatgaagaaatcacttattcaggggtttct
gatgggctctctcaagctggttgtcctcttgctgggctcgatagagccttggagagcagc
cttcaaaaaaacaagccaaacaagtctccagacagcacattgcgttctccatcatctcct
attcatgaagaagatgaagagaaactgtctgaagactccgactcacctcccccactaagt
ggggctgagctcgcccttcgggagagcagttcaccagagagcttcataactgaagaaatt
gaagaggtgccatctctaaagcaagagagccaagccccatctatagaggacgtcttacaa
gacagcagcactgagcatagaagccttaatcaacctgggattgatcctccagctgacata
tacttaccaggaagttcagcctcgatggaaactccccaaagccacagtgtgaatggttct
actcggcctccagtctgtgaccccagccctgaatatcgggaggctgaactgacttctctg
taa
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