Antechinus flavipes (yellow-footed antechinus): 127540083
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Entry
127540083 CDS
T08818
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127540083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afz03041
]
127540083
Spliceosome [BR:
afz03041
]
Complex A
Other components
Complex A specific factors
127540083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
127540083
NCBI-ProteinID:
XP_051820591
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All DBs
Position
6:complement(255318239..255332121)
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AA seq
789 aa
AA seq
DB search
MATGANATPLGKLHPPAAAPPGLPPGPGPKRAFEPPPPPPPGRGGGGPGPGAGLPLGPVG
PGLMAAPLAAAFPFAALPPPPPPPPPAAAAPGPTSGPPPQPPPPPGPAYPQAQPPPPPPP
PPPPPQPPQPPPPPLFQHVSPPQPPPQPLQDPQPGPAGGGGDFPNKKRKRSRWNQDTMEQ
KTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNS
EGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPE
INFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTA
NTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSE
TRSITNTTVCTKCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASA
GSASGPAAAPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSENRPYHGMHGGGPGG
PGGGPHNFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQ
YLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPP
PPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLP
PGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPP
APPPPPPQN
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggagcgaacgccacgccgctgggtaagctgcacccgccggccgcggccccg
cccggcctccccccggggcccgggcccaagcgggccttcgagccaccgccgccgccgccg
ccggggcggggggggggcgggccggggcccggggcggggctgccgctggggcctgtgggc
ccggggctgatggcggcgccgctggccgcggccttccccttcgcggcgctgccgccgcct
cccccgccgccaccgcccgccgccgccgcccctggcccgacctccgggcccccgccgcag
ccgcccccgccgccgggccccgcgtacccgcaggcgcagccgccccctccgccgccgccg
ccgcctcctccaccgcagccgccccagccgccgccgccgccgctcttccagcacgtgtct
ccaccgcagccgccgccgcagccgctccaggacccgcagccgggcccggccggcggggga
ggagatttccccaataagaagcggaagaggagccgctggaatcaggacacgatggaacag
aagaccgtgatcccgggcatgcctactgtgatccccccgggcctgacgagggagcaagaa
agagcttacatagtgcaactgcagatagaagacctgactcgcaaactgcgcacaggagac
ctgggcatcccccctaaccctgaggacaggtccccttcccctgagcccatttacaatagc
gaggggaagcgcctcaacacgagggaatttcgaacccggaagaagctggaggaagaaaga
cacaacctcatcaccgagatggtggcgctcaatcccgacttcaagcctcctgcagattac
aaacctccagcgacccgggtaagcgacaaggtgatgattccgcaagatgagtatccagaa
atcaactttgtgggacttctcattggacccaggggcaacaccttgaagaatattgagaag
gagtgcaacgccaagattatgatccgggggaaaggatctgtgaaggaaggcaaagtcggg
cgcaaagatggacagatgctgcccggggaggatgagcccctccatgccctggttactgcc
aataccatggagaatgtcaaaaaggcagtggaacagatccggaacattctgaagcagggc
attgaaaccccagaagaccagaatgatctccggaagatgcagcttcgagagttagcccgc
ctgaacggcactctgcgggaggatgacaacaggatcttaagaccatggcagagctcagag
acccgaagcatcaccaataccacggtctgcaccaaatgtggaggggctggccacattgct
tcagattgcaagttccaaaggcctggtgacccgcagtcggcccaggacaaagcccgcatg
gacaaggagtacctgtctctcatggcagagctgggcgaagctccggttccagcttctgcc
ggctcggcctctgggcccgccgccgccccgctggccagcgcacctcggcctgccgcccct
gccaacaacccgccgccgccgtctctcatgtccaccacccagagccgcccgccatggatg
aactcggggccctcggagaatcgcccgtaccacgggatgcacggcggagggcccggtggc
cccggcggcgggcctcacaacttcccacacccgctgcccagtctgacgggggggcacggt
ggtcaccccatgcagcacaaccccaacgggcccccgcccccctggatgcagccgccgcca
ccgccgatgaaccaggggccccacccacctgggcaccatggccctcctccaatggatcag
tacctgggaagtacgcctgtgggctctggggtctatcgcctacatcaaggaaaaggtatg
atgccgccgccgcctatgggcatgatgccgccgccgccgcctcccagtgggcagccccca
ccccctccctctggccctcttcccccatggcagcagcagcagcagcagcctccgcctccc
ccgccgcccagcagcagtatggcttccagtacccccttgccatggcagcaaaatacgacg
actaccaccacgagcgctggcacagggtccatcccgccatggcaacagcagcaggcggct
gccgcagcttctccaggagcccctcagatgcaaggcaaccccactatggtgcccctgccc
cccggggtccagccgcctctgccgcccggggcccccccccctccgccgcctccgccacct
ggttccgccggcatgatgtacgccccgccccctcctcctccgcctcccatggacccttct
aactttgtcaccatgatgggcatgggggtggcgggcatgccgcccttcgggatgcctcca
gctcccccaccgcctccaccacagaactag
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