Antechinus flavipes (yellow-footed antechinus): 127540097
Help
Entry
127540097 CDS
T08818
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03440
Homologous recombination
afz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127540097
03460 Fanconi anemia pathway
127540097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afz03400
]
127540097
DNA repair and recombination proteins [BR:
afz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
127540097
FA (Fanconi anemia) pathway
Downstream FA components
127540097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
127540097
NCBI-ProteinID:
XP_051820630
LinkDB
All DBs
Position
1:complement(309185855..309213836)
Genome browser
AA seq
1220 aa
AA seq
DB search
MEDSTGKVLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKAKNSSKIEQNCMLKQDS
SKQANSEPEDKFSPDDKLETDTLQIDACLDAEIKEKTTVTLDFESELLSTGNDSSGICPE
HVGDNCQKNFFNNITEPDNEKKQNKQPLNRMKNRKKILVTKGNESFFGSNSLINSGHRQQ
KQRSAIENPELPVFQIRNQFSCDKNEIQNSPRPITKIRECLVAAATELENDASGILKDLP
QIAALSLHNPLDDSNIQQLGCFPPEKICDNYKLTTQCSMNLPHTSPEKLEEGKQECVISP
GDLMVNDDINVDKMSNILILPSDGKSFSADELNYSLCKNTHMDEQNHSLKPLESFSNLLD
SRNENLQKKEVLSENVSPSIEMISPGPSENPLNSCTVFDGLPFPVEYYVRTTRQMSNCQR
MINLEAVIQNQLGVKRKGFKHKCKPVMKNLDLSSQEQSEFPLFDQGNSSSPLQKSFSSTP
EGSPNALPKKDNDFALNTCKRRSSRRQRGKRFFCKKVDDPDSELQVADKLSIKNSKEDVA
LCKEIPKKKEHVQGQKKVTGRSRCTLVNVDKKASTSITQGKLDYIQNKNLHSSIGNDSLI
LDDTSFDLSFHLKNEILSFEKLSAGSNSITDFDLPDEEFGFLKLEKLKSYSAKEMKPFES
GDGKKCNEDNCVSLKQLVPKKDITEKENLANDITVTRNSHPKKPECIPPNMLLFTPSSTN
LPATNNQVEADICSPVFPILGPTPVFGSQIHSGNMATEITGPTFCTPKHICLKEPDSLTG
NNQCNNSPNMLKLDANIHSFDREVKKQPDQIVSCEKKFDSDCNPQETLPSVDSITFKEKL
LLESTFQTKVRGDPVEIWHDSLELSNLQLVSKLKNPSNSCSVDVSTVWWEVTGCKESCII
TACEFTVSLWKSLDDWQWRKVHTWHFTEIPVLQIIPLWDACNLVCIALGHLEIREIRLLF
SSGEDECLKQSLVKSGNIKAVLGLRHKRLVCSNGTLHDHQVDLMTFSGSGRSKEKQTLMS
PEETILAFAEVQGMQDALLGTTLMSNIVIWNLKTGQLLKKMQIGTAYQASICHKAYSDMG
LLFVVLSHPHGKEIESMGSPIFRLIVINPKTALSVDVRPYSLPQGHTGRFLDGDVKDNLA
AAVLTSGTIAVWDLFLGHCRALLLPNSDGNWSFVKWSGFMNSFPLDLQRPEGDSHTSTFC
TATNHIKTIKKSEAKKLEIE
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcgacggggaaagtgctcagctgtgaggagaaggagaagttgaaggaaaag
ctggcattcttaaaaagagagtacagcaagacattggctcgattgcagcgggctcaaaga
gctgagaaggcaaaaaattcttcaaagattgaacagaattgcatgcttaaacaggattcc
tcaaaacaagcaaactcagagccagaagataaattctctcctgatgataaattagaaaca
gatacactacaaatcgatgcctgtcttgatgcagaaatcaaggagaaaaccacagtcaca
cttgactttgagtctgagttattgagcactggcaatgactcatcaggaatatgtcctgaa
catgtaggtgataactgccagaagaatttttttaataacattactgaaccagataatgag
aaaaagcaaaataaacaaccactgaatagaatgaagaaccgaaaaaagatactggtaaca
aaaggaaatgaatctttctttggctctaattcacttataaattctggacacagacaacaa
aaacaaagatctgctatagaaaatcctgagttgcctgtgtttcagataagaaatcagttt
tcatgtgataagaatgagattcagaattctccaagaccaatcacaaaaatcagggaatgt
cttgttgctgcagctactgaacttgaaaatgatgccagtggaattttgaaagatcttcct
cagatagctgctctttctttacataatcctttggatgacagtaacattcagcagcttggg
tgttttcctcctgaaaaaatctgtgataactataaactgactactcagtgttcaatgaac
cttcctcatacttcacctgaaaaattagaggaaggaaaacaagaatgtgttatctctcca
ggtgacctaatggtaaatgatgatatcaatgtggataagatgtcaaacattctcatcttg
ccatcagatggcaaatcattttctgcagatgagcttaattattcattatgcaaaaataca
catatggatgaacagaatcatagcttgaagcctttagaatcttttagtaacttacttgat
agtagaaatgaaaatcttcaaaagaaagaggtcctcagtgagaatgtgagtccttccata
gaaatgatctctcctggtccttcagaaaatcctttaaattcttgtacagtgtttgatggt
cttccttttcctgtggagtattatgttaggacaacacgacaaatgtcaaattgtcagagg
atgataaacctggaagctgtaattcagaatcaattaggtgtaaaaagaaaaggatttaag
cataaatgtaaacctgttatgaaaaatttggatctgtcctcccaagagcaaagtgaattt
ccattatttgaccaagggaattcaagtagtcctttacaaaagtctttctcatcaactcct
gaaggcagccctaatgctttgcctaaaaaagacaatgattttgctttgaacacttgtaaa
agacgatcaagtagaagacagagagggaaaagattcttttgcaaaaaagtagatgatcca
gactctgaactgcaagttgctgataagctgagtattaaaaattccaaggaagatgttgct
ttgtgcaaagagattccaaagaaaaaagaacatgttcagggtcaaaaaaaagtcacaggc
agatcaaggtgtacccttgttaatgttgacaaaaaagcatccacatcaataacacaaggg
aaactagattatattcaaaataagaaccttcattcttctattggtaatgactccttgatt
ttggatgataccagttttgatctttcatttcatcttaagaatgagatacttagttttgag
aagttgtcggcaggaagcaacagcatcactgactttgatttgcctgatgaggagtttggt
tttcttaaacttgagaaattaaagtcttactcagcaaaagaaatgaaaccctttgaatca
ggagatggaaaaaagtgtaatgaagataactgtgtttctttgaagcaactggtgcctaaa
aaagacattacagaaaaggagaatttagcgaatgatattactgtaacaagaaactcacat
ccaaaaaaaccagagtgtattcctccaaatatgttacttttcacaccttctagtactaac
ctgcctgccacaaataaccaggttgaagcagatatatgttctcctgttttccctatcctc
ggtcctactccagtttttggctcccaaattcacagtggaaatatggctacagaaattact
ggacctactttttgtacacctaaacatatttgcttgaaagaaccagacagtcttactgga
aataatcagtgtaataattcacctaatatgttgaaattggatgctaacatacattcattc
gacagggaagtaaaaaaacagcctgaccaaatagtatcttgtgaaaagaaatttgatagt
gactgtaatcctcaagaaactcttccatctgttgattcaatcactttcaaagaaaaacta
ttattggaaagcactttccagactaaggtaagaggagatcctgttgaaatttggcatgat
agtttggaactgagcaacctacagctggtatcaaagttaaagaatccttcaaattcctgt
tctgtggatgtgagtactgtgtggtgggaagtaactggctgtaaggaatcatgtatcata
actgcctgtgaatttacagtttctctctggaaatctctggatgactggcagtggagaaaa
gttcacacatggcacttcacagagattccagtactacaaattattccactttgggatgct
tgtaatcttgtgtgtattgctttgggacatctagaaattagagaaatcagattattattt
tcttctggtgaggatgaatgcttaaagcagtcacttgtaaaatctggaaatataaaagca
gtgcttggacttagacacaaaagactagtctgtagcaatgggacccttcatgatcaccaa
gtagacctcatgaccttttcaggatctggaagaagtaaagaaaaacaaactttgatgtct
ccagaagaaaccatcttggcttttgctgaagttcaaggaatgcaagatgctttgcttggc
acaaccctgatgagcaatattgttatctggaacttaaaaactggtcaacttctgaaaaag
atgcaaattggtactgcctaccaagcttcaatatgtcacaaagcctattctgatatgggg
ctcctgtttgttgttttaagtcatcctcatggcaaagaaattgaatcaatgggaagtcct
atatttcggttgattgtgattaatcctaaaacggctctaagtgttgatgtaaggccctac
tcacttccccaaggccatactggaaggtttctggatggggacgtgaaggataatttagca
gcagctgtattaacttctggaacaatagctgtttgggacttgtttctaggacattgtaga
gctctgcttttgcccaattctgatggaaattggtcttttgttaaatggtcaggattcatg
aattctttcccattggacctgcaacgaccagaaggggattcccacacctcaactttctgc
actgccactaaccacatcaagaccattaaaaaatcagaggcaaagaaactggaaattgag
tag
DBGET
integrated database retrieval system
