Antechinus flavipes (yellow-footed antechinus): 127540281
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Entry
127540281 CDS
T08818
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127540281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afz04121
]
127540281
Enzymes [BR:
afz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127540281
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
HECT type E3
127540281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
127540281
NCBI-ProteinID:
XP_051820862
LinkDB
All DBs
Position
6:complement(155430957..155594178)
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AA seq
1052 aa
AA seq
DB search
MLCWGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCG
SNTKGQLGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHT
TTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQA
SPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLL
RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQI
ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSF
KYHIVKHIFSGGDQTFVLCSKYENSSPADDFRIMNQAQYTSLINDETIAIWRQKLSEHSN
SNSINSGVLQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLDSTRVLFEKLMNSQHSML
LEQILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTLPLAMAILRLDA
NPSKVLDNWWCQVCPRYFLKLVDLYKSAVVYLLSGRKTLLIPVLFSSYITAALKLLEKLH
KVNQKVKHVEYDKFYIPEISHLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFVFD
AQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRE
LSIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFS
DTCFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSL
QQLLDYPGEDVEEVFCLNFTICRESYGVVEEKKLIPGGDKMTVQKDNRQEFVDAYVNYVF
HLSIHEWYAAFSSGFLKVCGGKVLELFQPSELRAMIVGNSNYNWEELEESTIYKGDYSPS
HPTVKMFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMSSLRIIIQSTTSGEEYLPVAHTC
YNLLDLPKYSSKEILNIRLTQAIDHYEGFSLA
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgttatgttggggatattggtctttgggccatcctggtggtattagcagcaatctccaa
ggaattgtgactgagccacaagcatatggatttatttctgacagaagcatcaaagaagtg
gcttgtggaggcaaccactctatttttttactggaggatggggaagtttatacatgtggt
tcgaacaccaaaggacaactaggccatgaaagagaaggaaataagccagagcaaattggg
gctttagcagatcagcacatagtccacgttgcctgtggcgagtctcatagcttggccctt
agtgaccagggacagctcttctcttggggtgcaggtagtgatggacaacttggacataca
actactgaagattctgttgcaatacccaggttaataaagaaactcaatcaacagatgata
ttgcaggtttcctgtggcaactggcactgcatggctctcgcagctgatgggcagtttttc
acttggggacagaaccgccatgggcagttgggcctggggaaagaattcccttcccaagct
agtccccagagagtgaaatccctagaggggatccccctggctcaggttgctgcgggaggg
gcacacagctttgccttgtctctctctggagctgtatttggatggggaaggaacaatgct
ggtcagctgggactcagtgatgaaacagatcgtcaatctccttgtcatgtgaaactttta
cgaactcaaaaagttgtttatattagttgtggagaagaacatacagcagtgctcacaaag
agtgggggagtgttcacttttggtgctggttcctttggacagcttggacatgactccatg
aatgatgaggttaatccaagaagggttctagaattaatgggcagtgaagtaactcagatt
gcttgtggcagacagcacactctagcctttgtgccttcctcggggctcatctatgcattt
ggctgtggagcaagaggccagttaggaactggacatacatgtaatgtaaagtgcccatct
cctgtaaagggtcactgggctgctcacaatggccaactttcatctagagctgattccttt
aaatatcacattgttaaacatatcttctcaggaggagaccaaacttttgtactttgctcc
aaatacgagaattcctctcctgcagatgacttcaggattatgaatcaagcacagtatacc
agtttaataaatgatgaaactatagctatttggagacaaaaactatcagagcatagcaac
tccaattcaatcaacagtggtgttctgcaaatattgtcctcagctgcctgttggaatgga
agttttcttgaaaaaaaaattgatgagcattttaaaactagtcccaaaattccagggatt
gaccttgattctaccagagtattatttgagaagctaatgaactctcagcactcgatgctt
ctagaacagatcttaaaaagctttgaaagtttcctgattccacagttgtccagttcacca
ccagatgttgaagcaatgagaatttatttaatacttcctgaattccctctacttcaggat
tctaaatattatataacattaacccttcccctggcaatggctattctacgactggatgca
aaccctagtaaagtcttagataactggtggtgtcaggtgtgcccaagatatttcttgaag
ctagtagacctttataaaagtgcagtagtttatctcctgagtggaagaaaaacattgttg
attcctgttctgtttagcagttatataacagcagcactcaagctattggaaaaactgcat
aaggtaaaccagaaagtgaaacatgtggaatatgacaagttttacatacctgaaatttcc
catcttgtggacattcaggaagattatcttatgtggttcttacatcaagcaggaatgaaa
gttagaccatctataatgcaggatgctgtgactctctgttcctatccatttgtctttgat
gctcaagctaagaccaaaatgttgcagacagatgctgaactgcagatgcaggtcgctatc
aatggagcaaatttgcagaatgtgttcatgctcctcacattggagcctctgctggccaga
agcccattccttgtccttcatgttcggaggagcaaccttgttggagatgccctaagagag
ctgagtattcactccgacattgatttgaaaaagcctctgaaagtaatctttgacggtgaa
gaagcagtggatgctggtggtgtcacaaaggaattcttccttttgctcttgaaggaactt
ttgaatcctatctatggaatgtttacttattatcaagattcaaacctcttatggttttct
gacacatgttttgtagagcacaactggtttcacctgattggtataatctgtggactagct
atctacaacttcactgtagtagatcttcactttccactggctctctacaaaaaattacta
aatgtaaaacctggattggaagatttaaaggagctatcacctactgaaggaaggagtctt
cagcagcttcttgattacccaggggaagatgtagaagaggtgttctgtctcaacttcaca
atatgcagagagagttatggggtagttgaagagaagaagcttatacctggaggagacaaa
atgactgttcagaaagacaacaggcaggaatttgtggatgcttatgtcaactatgtcttc
cacttgtcaatccatgaatggtatgcagccttttcgagtggttttctgaaggtgtgtgga
ggcaaagtattggaactcttccagccttcagaactcagggccatgattgtggggaacagc
aattataactgggaagagttggaagagagcacaatctataaaggtgattattcaccttca
catcccacagtgaaaatgttttgggaaacttttcatgaatttccactggaaaagaagaag
aaatttcttttatttctgacaggcagtgaccggatccctatctatggaatgtcaagcctg
cgaatcatcatccagtccacaaccagtggggaggaatatttgcctgtggctcatacttgc
tacaatcttctagatctacccaaatacagcagcaaggagatcctgaatatacgcctgaca
caggctattgaccactatgagggatttagtttagcctga
DBGET
integrated database retrieval system
