KEGG   Antechinus flavipes (yellow-footed antechinus): 127540298
Entry
127540298         CDS       T08818                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03020  RNA polymerase
afz03420  Nucleotide excision repair
afz05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:afz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127540298
  09124 Replication and repair
   03420 Nucleotide excision repair
    127540298
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    127540298
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afz03021]
    127540298
   03019 Messenger RNA biogenesis [BR:afz03019]
    127540298
   03400 DNA repair and recombination proteins [BR:afz03400]
    127540298
Transcription machinery [BR:afz03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     127540298
Messenger RNA biogenesis [BR:afz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     127540298
DNA repair and recombination proteins [BR:afz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127540298
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 127540298
NCBI-ProteinID: XP_051820893
LinkDB
Position
6:254024549..254027586
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTVDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttaccacatctccctggagcacgagatcctgttacacccgcggtacttcggtccg
aacctgctcaacacggtcaagcagaaactgttcaccgaggtggagggcacatgcacgggc
aaatacggttttgtgatcgccgtcacaaccatcgacaacatcggggccggggtgatccag
cctgggcgagggtttgtgctgtatcctgtcaaatacaaagctattgtcttccgccccttc
aagggggaggttgtggatgctgtggtcacccaggtcaacaaggtggggctcttcaccgag
attggacccatgtcttgcttcatctctcggcattccatcccctccgagatggaatttgat
cccaactctaaccctccgtgctacaaaacagtggatgaggacatcgtgattcagcaggac
gacgaaatccgcctgaagattgtgggaacccgggtggataagaacgacattttcgcgatc
ggctccctgatggacgactacctgggtctcgtgagctga

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