Antechinus flavipes (yellow-footed antechinus): 127540912
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Entry
127540912 CDS
T08818
Name
(RefSeq) dynein axonemal intermediate chain 1
KO
K10409
dynein axonemal intermediate chain 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04814
Motor proteins
afz05014
Amyotrophic lateral sclerosis
afz05016
Huntington disease
afz05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127540912
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127540912
05016 Huntington disease
127540912
05022 Pathways of neurodegeneration - multiple diseases
127540912
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
afz03037
]
127540912
04812 Cytoskeleton proteins [BR:
afz04812
]
127540912
Cilium and associated proteins [BR:
afz03037
]
Motile cilia and associated proteins
Dynein arm
127540912
Cytoskeleton proteins [BR:
afz04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
127540912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR75_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_RFWD3
DUF4191
Beta-prop_RSE1_2nd
Beta-prop_WDR90_POC16_2nd
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
127540912
NCBI-ProteinID:
XP_051821844
LinkDB
All DBs
Position
1:complement(312935594..313214636)
Genome browser
AA seq
708 aa
AA seq
DB search
MAPKTAPRRLSGTQPTTRTTRKRDEDAGPDVGEGTDDWAQAKTLIKPPDQLELTEAELKE
EFTRILTANNPHAPQNIIRFNFKEGTFKPISFVGQLAVHFSLVGNMILKDSDEGRRQNYR
AEMASSQEAIEVQPAEEGEEGEEGEEGEEGGEGEGEEGGEGGEAKEAGSHAEIPTPGAAE
AEIEEDIFIPRKPTERKLTNKFNFSERASQTFNNPLRARECQMEPPPRANFSATANQWEI
YDAYMEELEKQEKNKEKEKGKGPVAKKVGKMKERKKTSMESQSDDITKVTQAAKIVERMV
NQNTYDDIAQDFKYYEDAADEYRDQEGTLLPLWKFTYDKAKRLAVTALCWNPKYKDLFAV
GHGSYDFMKQNRGMLLLYTLKNPSFPEYIFSSESGIMCLDMHVEHPYLVAVGYYDGNVAI
YNLKKPHSQPSYKSSATLGKHSEPVWQVRWQKDDMDNNLNFFSVSSDGRIVSWTLVKNEL
MHTDIIKLKVEGTTTVGPEELNVYTVGCGTAFDFHKQIDYLFLVGTEEGKIYKCSKTYSS
QFLDMFEAHNMAVDAVTWNPYHSKVFISCSSDWTVKIWDHTIKKPMFVYDLNSAVGDVAW
APYSSTVFAAVTTDGKAHVFDLVINKYESICNQPVVAKKKNKITHVQFNAIHPIIIVGDD
RGQITCLKLSPNLRKMPKEKKGQEVKKGPAVEIAKLDKLLNLVKEVKT
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggccccgaaaactgcgccccgtagattgagtggcacacaaccaactaccaggacaacc
agaaaaagagatgaagatgctggcccagatgtgggagaaggaacagatgattgggctcag
gccaagacgctgatcaaacccccagaccagttggagctgactgaagcggagttaaaagaa
gaattcactcgtatcctgacagccaataacccacatgctcctcaaaatatcatcagattc
aactttaaagaagggacatttaaacctataagttttgtaggccaactagcagtccacttc
agcttggttgggaacatgatcctcaaagactcagatgaaggcagacgacaaaattaccga
gcagaaatggcaagttctcaggaggctatagaggtgcagcctgcagaagaaggtgaggaa
ggtgaggaaggtgaggaaggtgaggaaggtggagaaggtgaaggtgaagaaggtggtgaa
ggtggagaagcgaaggaagcaggaagccacgcagaaattccgacacctggagcagcagaa
gcagaaatagaagaagacatttttatccctagaaagccaacggaacggaaactcaccaac
aagtttaattttagtgaaagagcatctcagaccttcaacaatcctttacgggcccgagag
tgtcaaatggaacctccccctagagcaaacttctctgctacagctaatcagtgggagatc
tatgatgcatacatggaagagctggagaagcaagaaaagaacaaggagaaggagaagggg
aaaggtccagtggctaaaaaagttgggaagatgaaggagaggaagaagacatccatggaa
tcccagagtgatgacataaccaaggtgacccaagcagccaaaatagtggaacgaatggtc
aatcagaacacgtatgatgatattgcccaggattttaagtattatgaagatgcagctgat
gaatatcgggaccaggagggcactttgctccctctctggaagttcacatatgataaggca
aagcgcctggccgtgacagccctctgctggaatccaaaatataaggatctgtttgcagtg
ggacatggctcttatgacttcatgaagcaaaaccggggcatgttgctcctgtacaccctg
aagaaccccagcttcccagagtatatcttcagcagcgagagtggtatcatgtgcctggac
atgcacgtggagcacccttatctggtggccgtgggctactatgacggcaacgtggccatc
tacaatctcaagaagccccattcacagccgtcctacaagagctcagccaccttaggaaaa
cactcagagcctgtgtggcaggtcaggtggcagaaggacgacatggacaacaatctgaac
ttcttctcagtgtcatctgatggaaggattgtatcctggactctggtgaagaatgagctg
atgcacacagacatcatcaagctaaaagtggagggcacaacgactgtaggtccagaggaa
ctgaatgtgtacacagtgggctgtgggaccgcttttgatttccacaaacagattgactac
ttgtttctcgtgggcactgaggagggtaaaatctacaaatgctccaaaacctactccagc
caattccttgacatgtttgaggcccacaatatggcagtggacgcagtgacctggaatcca
taccactccaaagtctttatatcctgcagctcagactggacagtgaaaatctgggaccat
accatcaagaaacccatgttcgtctatgacttgaattctgctgtgggtgatgtggcttgg
gccccctattcctctacggtttttgctgcagtcaccactgatgggaaggcccacgtgttc
gacctggtcatcaacaaatatgagtcaatctgcaaccagccagtagtggcaaagaagaaa
aataaaattacccatgtgcaattcaatgctatccaccctatcattattgtcggggatgat
cgtggtcagattacatgcctcaaactctcacccaatctgcgcaagatgcccaaggagaag
aagggacaggaggtgaagaaaggcccagcagtagagattgccaaactggacaaactgttg
aacctcgtaaaggaagtgaagacctga
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