Antechinus flavipes (yellow-footed antechinus): 127541021
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Entry
127541021 CDS
T08818
Name
(RefSeq) caprin-1 isoform X1
KO
K18743
caprin-1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127541021
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
127541021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
127541021
NCBI-ProteinID:
XP_051822029
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All DBs
Position
6:228251294..228298464
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AA seq
719 aa
AA seq
DB search
MPSATNTTSSGKASGPPPGSSSSGAEAAAAGGASGPAGAAAAGSQQQAASGGGTSSVQTE
AMKQILGVIDKKLRNLEKKKGKLDDYQDRMNKGERLNQDQLDAVSKYQEVTNNLEFAKEL
QRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQFVLDKLGDDDVRSDLKQGV
NGVPILSENEMSVLDDFYKLVQPERDMSMRLNEQYEQASIHLWDLLEGKEKPVCGTTYKV
LKELVERIFQTSYFDSTHNHQNGLCEEEETAALPTGEDQAAEAEVEPAEEYAEQNEVEST
EYVNRQFMAETQFSNSEKEQVDEWTVETVEVVNSLQQQPPAASPSVPEAHSLAPVAQADP
LVRRQRVQDLMAQMQGPYNFIQDSMLDFESQTLDPAIVSAQPMNPSQNMDMPQLVCPPVH
TESRLAQPNPVPVQPEATQVRVPLVSSTSEGYTTSQPMYQPSHAGDQRPQKESIDQIQAA
ISLTADQAPASSPLPAASQPQVFPAGSSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVN
EPETLKQQNQYQASYNQSFSNQPHQVEQTELQQEQLQAVVGTYHGSQDQSHQVAGNHQQP
PQQNTGFPRSSQPYYNSRGVSRGGSRGTRGLMNGYRGPANGFRGGYDGYRPSFSNTPNSG
YTQSQFSAPRDYSNYQRDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGMPPMNTQQVN
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggccaccaacaccaccagcagcggcaaggcgtccgggccgccgccgggctcc
tcctcctctggggccgaggcggcggcggcaggcggcgcctcggggcccgcgggcgcggcg
gcggcggggtcgcagcagcaggccgcgagcggcggtggcaccagctcggtgcagaccgag
gccatgaagcagatcctgggcgtgatcgacaagaagctccgcaacctggagaagaaaaag
ggcaagcttgatgattaccaggatcgaatgaacaagggggaaagacttaatcaagatcaa
ctggatgcagtgtctaagtaccaggaagtcacaaataacttggagtttgcaaaggagctg
cagcggagtttcatggccttgagccaagatattcagaaaacaataaaaaagacagcccgg
cgagaacagctcatgcgagaggaagcagaacaaaagcgtttaaagactgtccttgagttg
cagtttgttttggacaagttaggcgatgatgatgtccgcagcgacttgaagcaaggtgtc
aatggtgtgcccatactaagtgaaaatgaaatgtcagttctggatgacttctacaaacta
gttcaacctgaacgggacatgagcatgaggttgaatgaacagtatgaacaagcatccatt
catctgtgggacttgttggagggaaaggaaaaaccagtatgtggaacaacctacaaagtc
ctaaaggagctggttgaacgcatttttcagaccagttactttgatagcactcacaaccac
caaaatggcttgtgtgaggaagaagagacagctgctcttccaacaggggaagaccaagca
gccgaagctgaagttgagccagcagaagaatatgctgaacaaaatgaagttgaatcaaca
gagtatgtaaatagacagtttatggcagagactcagttcagcaacagtgaaaaggaacag
gtagatgaatggacagttgaaacagttgaggtggtaaactcacttcagcagcagccgccg
gccgcatccccctctgtgccagaggcccactccttggctcctgtggctcaggccgatcct
ctggtgagaaggcagagagtacaggacctcatggcacaaatgcaggggccgtacaatttc
atacaggattccatgctggactttgaaagtcagacacttgatcctgcgattgtgtctgca
cagcctatgaatccgtcccagaacatggacatgcctcagcttgtctgtcctccagttcac
actgaatctagacttgctcagcctaatccagttcctgtacagccagaagctacgcaggtg
agggtacctttggtttcttcgactagcgagggatacacaacatcccagcccatgtaccag
ccttctcatgctggagaccagcgacctcagaaggaatcaattgaccagattcaggctgca
atatcattgactgcagaccaggccccggcatcctcaccccttcctgctgcctctcagccc
caggtattcccagctggatcaagcaaacctttacatagcagcggcatcaatgtcaatgca
gctccattccagtccatgcaaacggtattcaatatgaatgcccctgttcctcctgttaat
gagccagaaactttaaagcaacaaaatcagtaccaggctagttacaaccagagcttttcc
aatcagcctcaccaagtagaacaaacagaacttcaacaagagcagcttcaggccgtggtt
ggtacctaccatggttcccaggaccagtctcaccaagtggcaggtaaccaccagcaacct
ccacaacagaacactggatttccacgaagtagtcagccctattataatagccgaggagtg
tcacgtggaggatctcgtggcactagaggcttaatgaatggatataggggccctgccaat
ggatttagaggaggctatgatggctaccgcccttcattttctaacactccaaatagtggc
tacacgcaatcccagttcagtgctccacgagattactccaattaccagcgggatggatat
caacaaaacttcaagagaggttctgggcagagtggaccacggggagccccaagaggtcgt
ggagggcccccaagacccaaccgagggatgccgccaatgaacactcagcaagtgaattaa
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