Antechinus flavipes (yellow-footed antechinus): 127541277
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Entry
127541277 CDS
T08818
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127541277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afz03041
]
127541277
03009 Ribosome biogenesis [BR:
afz03009
]
127541277
Enzymes [BR:
afz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127541277
Spliceosome [BR:
afz03041
]
Complex A
U2 snRNP components
U2 related factors
127541277
Complex B
127541277
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
127541277
Ribosome biogenesis [BR:
afz03009
]
Eukaryotic type
90S particles
Helicases
127541277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
127541277
NCBI-ProteinID:
XP_051822503
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All DBs
Position
6:complement(14893585..14959214)
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AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSTHSTHSTHSAHSTHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcaccggctggacctcggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaggatcgagatcgggaccgggaccgtgaagatcgttccaaagatcgt
gacagagaacgtgacaggggagatagagagagagaaagagagaaagagaaggaaaaggaa
ttgcgtgcctctactaatgctatgctcattagtgctggattaccacctttaaaagcatcg
cattcagcacattcaacacactcaacacactcaacacattcaacacattctgctcattca
acacacacaggacatgcaggacacacatcacttccacagtgtattaatccattcactaat
ctaccccacacccctcgttactatgacattctaaagaagcggcttcagctccctgtttgg
gaatataaggataggtttacagatattcttgttaggcatcagtcctttgtactagttggt
gagaccggctctggtaaaacaacccagatccctcagtggtgtgttgagtacatgcgctcc
ttaccgggccccaagagaggagtggcctgcacacagcccaggagagttgctgcaatgagt
gtggctcagagagttgctgatgaaatggatgtgatgttgggccaggaagtcgggtactcc
attcgatttgaagactgcagtagtgcaaaaactattctcaaatatatgacagatggaatg
ttacttcgagaagctatgaatgatccccttctagagcgctatggtgttataatccttgat
gaagctcatgaaaggaccttggccacagacattctcatgggagttctgaaggaagttgtg
aggcagagatcagatttaaaggttattgttatgagtgctactttagatgcggggaaattt
cagatttactttgataattgtccccttttaactatccctggccgtacacatcctgtcgag
attttttatactccagaaccagagagagattatcttgaagcagcaatccgaactgtgata
cagattcatatgtgtgaagaggaggaaggggatcttcttctttttcttactggacaagag
gaaattgatgaagcctgtaagagaataaagcgtgaagttgatgatttaggtccagaagtt
ggtgacattaaaatcattcctttgtattccacacttccacctcaacaacaacagagaatt
tttgaacctcctcctccaaaaaaacaaaatggagcaataggacgaaaggtagtagtgtca
accaatattgcagagacatcactaacaatagatggtgttgtgtttgtcatcgaccctgga
tttgcaaaacaaaaggtatataatcctcgtatcagagtggagtctcttttggtgacagca
atcagcaaagcttctgcccagcaaagagctggtcgagctggccgtacaaggcctggaaaa
tgttttagactttatacagagaaagcctataaaactgaaatgcaggacaatacttaccct
gaaattttgaggtctaatttgggttcagtggtgttacagttgaagaaacttggtatagat
gacttggtacactttgattttatggatccaccagctcctgaaactctgatgagagcccta
gagcttttgaattacctagctgctttaaatgacgatggagacttgactgaattgggatcc
atgatggcagaatttccattggatccacagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagcagcagatgaagccaagatgaggtttgcccacata
gatggagatcatctgacactgctgaacgtttaccacgcttttaaacaaaatcatgagtcg
gttcagtggtgttatgacaacttcattaactacaggtccctgatgtctgcagacaatgta
cgccagcagctgtcgcgaatcatggacagatttaatttgcctcgtagaagtacagatttc
acaagcagagactattacattaatataagaaaagctttggttactgggtattttatgcag
gtggcacatttggaacggacagggcattacttaactgtaaaggataaccaagtagtgcag
ctacatccttcaactgttctggatcacaagccagaatgggtgctttacaatgaatttgtc
ctgacaacaaagaattatatccggacatgtacagatattaaaccggaatggttggtgaaa
attgcccctcaatattatgatatgagcaatttcccacagtgtgaagcgaagagacagttg
gaccgcatcattgccaaactccagtccaaggagtactcacagtactga
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