Antechinus flavipes (yellow-footed antechinus): 127541818
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Entry
127541818 CDS
T08818
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz02010
ABC transporters
afz04148
Efferocytosis
afz04975
Fat digestion and absorption
afz04979
Cholesterol metabolism
afz05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127541818
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127541818
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
127541818
04979 Cholesterol metabolism
127541818
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
127541818
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afz02000
]
127541818
Transporters [BR:
afz02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
127541818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
127541818
NCBI-ProteinID:
XP_051823032
LinkDB
All DBs
Position
1:complement(328939866..329086020)
Genome browser
AA seq
2260 aa
AA seq
DB search
MAFWSQLGLLLWKNFTFRRRQTCQLLLEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLSWVQGIICNANNPCFRYPTPGESPGVVGNFDESILSRLFSDARRLLLYSQKDT
SMKDTQKLLGTLQRLGTFNSSMKLQDFLVDNETFSGFLQHNLTMPYPAVEEVLVTDIGLQ
QALLNGYKWKLKDLCKESNLTGRIKLHNLNTGGLCDLPKEKLDAAEQVFSSNIDLLKPLL
KGINSHPILPNQELVETMKTMLDSLGKLAKELSSMKSWSDMRQEVIFLTNMNSSGSSTQI
YQAVSRIMCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEEEVTNFYDNSTTPYCNELMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRTVMSEVNRTFQNLGVFHDLKGMWEEIS
PKIWTFMENSQEMDLIRTLLDNKINSNLWGQHLNGLNWTASDIAAFLAKYPEDVQMASGP
VYTWREAFNETNRAIQTIARFMECVNLDKLEPIPTEVRLINKSMALLDERKFWAGIVFTG
IAPDSVELPHHVKYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDLRYVWGGFAYLQDVV
EQAIIRTLTGSEENTGIYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVLILKLGNLLPYSDPSVVFL
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSLKLFAS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPLEEDGFSLTTSISMMLFDTFLYGVMTW
YIESVFPGQYGIPRPWYFPFTKSYWFGEKSDEKGHLGSRQKGTSEICMEEEPSHLRLGVS
IQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSELSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKCVKEEMEQMVLDVG
LPHKLKTKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQG
RTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSS
CRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVSEARLVEDIG
HELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEDSGVDAET
SDGTLPARRNRRAFGDRQSCLRPFTEDDAFDPNDSDVDPESRETDLLSGMDGKGSYQVKG
WKLTQQQFVALLWKRWLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQP
WMYNEQYTFISNDAPEDAGTQKLLDALTKSPGFGTRCMEGQSIPDVPCEGGEDKWTTASV
PESVMDIFRKGNWTMENPSPACECSSDKIKKMLPVCPAGAGGLPPPQRIQNTSDILQNLT
GRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGTSNVRGLPPSNEINVAIDQVKKL
FQLTKDSSADRFLNSLGNFMTGLDTKNNVKVWFNNKGWHAIGSFLNVINNAILRANLPEG
KNPNHYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERV
SKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALL
LLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIND
ILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGV
VFFLITVLIQYRFFIKPRPIIAKLPPLNDEDEDVRRERQRILDGGGQNDILAIKELTKVY
RSKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTSVTKGDAFLNKNSILSDI
QEVHQNMGYCPQFDAITELMTGREHVEFFALLRGVPEKEVGKVGDWAIRKLGLVKYGEKY
AGNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTS
HSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFGV
AFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNFA
KDQSDDDHLKDLSLHKNQTVVDVAILKSFLQDDKVRESYV
NT seq
6783 nt
NT seq
+upstream
nt +downstream
nt
atggccttttggtctcagctggggctactgctttggaagaactttacttttcgaagaaga
caaacatgtcaattattgcttgaagtggcctggcctctgtttatcttcttcatattgatt
tctgttcgactcagctatccaccctatgaacaacatgaatgccactttccaaacaaagct
atgccatctgcaggaacactttcttgggttcaggggattatctgcaatgctaacaacccg
tgtttccgctatccaacccctggtgaatctcctggtgttgttggaaacttcgacgagtcc
attctttcacggctgttctcagatgctcggcgactcctcttatacagtcagaaagatacc
agtatgaaggacacacagaagcttttgggaactttgcagagactggggactttcaactca
agcatgaaacttcaggatttcctggtggacaatgaaacattctctggatttttgcagcac
aacctcaccatgccctatccagctgtggaggaggttctggtcactgatatcggtctccaa
caggctcttttaaatggctataagtggaagctgaaagacctatgcaaagaatcaaactta
acaggaaggattaaacttcacaacctgaatacaggagggctttgtgatctgccaaaagaa
aaactagacgcagcagaacaagtcttctcttccaacatagaccttctgaaacctctcctg
aaaggaataaactcccatcctatcctgccaaaccaggagctggttgaaacaatgaaaact
atgctagatagtcttggaaagctagccaaagagttatccagcatgaagagctggagtgac
atgagacaagaggtgatattcctaaccaacatgaacagtagcggttcctcgacccagatc
taccaggcagtgtctcggatcatgtgtggccatcctgaaggtggaggactgaagatcaaa
tcccttaattggtatgaggacaacaactataaagccctatttggaggaaatagtaccgaa
gaggaggtgacaaatttctatgataattctacaactccttattgcaatgaattgatgaag
aatctggaatctagtcctctttcccgaattatctggaaggctctaaagcctctccttgtt
ggaaagatcctatatactcctgatactccagccacaagaacagtcatgtctgaggtgaat
aggacttttcagaacctgggtgtcttccatgacctgaaagggatgtgggaagagatcagc
cccaaaatctggacattcatggaaaacagccaggaaatggatcttatccggactctgttg
gataataaaatcaacagcaatctttggggacagcacttgaatggtttaaactggacagct
tcggacattgcagcctttttagctaagtacccagaagatgtccaaatggccagtggtcca
gtgtacacctggagagaagcttttaatgagacaaatcgagcaatccagacaattgctcga
ttcatggagtgtgtcaacctagacaaacttgagccaattcctacggaagttcgactgatc
aacaagtctatggcgttactggatgaaaggaaattctgggctggcatagtgttcactggc
attgctcctgatagtgttgaactacctcaccacgtcaaatacaagatccggatggatatt
gacaatgtagaaaggacaaacaagatcaaggatgcgtactgggaccctggtcctcgggcg
gatccctttgaagacctgcgttatgtctgggggggctttgcatacctgcaggacgtggtg
gagcaggcgattatccggacactgacaggctctgaggagaacaccggcatttatgtgcag
cagatgccttatccttgttatgtcgacgatatatttctgcgggtgatgagccgctcaatg
cctctcttcatgaccctggcttggatatattctgtggctgtgatcattaaggggattgtg
tacgagaaggaggcccgtctgaaggagaccatgaggatcatgggtttggacaacggcatc
ctttggtttagctggttcattagcagtctcatccctctccttgtgagcgcagggctactg
gtgttaatcctgaagctcggaaacttgctgccctacagcgaccccagcgtggtcttcctg
tttctctctgtctttgctgtggtgaccatcttgcaatgcttcttgatcagtacactcttc
tccagagccaacttggctgcggcctgtggtgggatcatctacttcacactctacctgccc
tatgtcctgtgtgttgcttggcaggactacgtgggcttctcgctgaaactttttgctagc
cttctgtctcctgtagcctttgggtttggttgtgagtactttgccctctttgaggagcag
ggcattggagtgcagtgggacaatcttttcgagagccctctagaggaagatggcttcagc
cttactacctcaatctccatgatgttgtttgataccttcctgtatggtgtgatgacctgg
tatattgagtctgtttttccaggtcaatatggaattcccaggccctggtatttccctttt
accaaatcttactggtttggtgagaaaagcgatgaaaagggtcatcttggttctaggcaa
aaaggaacttcagaaatctgcatggaagaagaacccagccacttgcgcctgggagtttcc
attcagaacctggtaaaggtttatcgagatggcatgaaggtggcagtggatggtcttgca
ctgaatttctatgaagggcagattacatcgtttctgggacataatggagctgggaaaacc
accaccatgtccatcttgactggcttattccccccaacctcgggcactgcttacatcctt
gggaaagatattcgttcagagctgagcactataaggcagaacctgggggtctgtcctcag
cataatgtgctttttgacatgctaacagtggaggaacacatctggttctatgcccgctta
aaagggctgtcagaaaagtgtgtgaaggaagagatggagcagatggtgttggatgtgggt
ttgcctcacaaactgaaaactaagacgagtcagttgtctggaggaatgcaaagaaaactg
tctgtggctctggcctttgttggaggatctaaagtggtcattttagatgaaccaacagct
ggggtggacccttactctcgcagagggatatgggaactgcttctgaaatatcgtcaaggt
cgcaccatcatcctctccactcatcacatggatgaggcagatatactgggtgacaggatt
gccataatttctcatgggaagttgtgttgtgtgggctcctctttgtttttgaagaatcag
ctgggaacagggtactatctgaccctggtcaagaaggatgtggattcctccctcagttcc
tgtagaaacagcagcagcacagtgtcttacctgaaaaaggaagacagcgtttctcagagc
agctctgatgcaggtctgggcagtgaccatgaaagtgatactctgacaatagatgtttct
gctatatccaatctcattacgaagcatgtctcagaggctcggctagtggaggacattggg
catgaattaacctacgtgctcccctacgaagctgccaaagaaggagcatttgtagagctt
ttccatgaaatcgatgaccgactctctgacctgggcatttcgagttatggcatctcagag
accacgttggaggagatattccttaaagtggctgaagatagtggcgtagatgcagaaacc
tcagatggaaccttacctgcgagaaggaacagacgtgcctttggagaccgccagagctgt
ctgcgcccatttactgaagatgatgcttttgatcccaatgactcggatgtagatccagaa
tcccgagagacagacctcctcagcggcatggatggcaaaggctcctaccaggtgaaaggt
tggaaactcacccaacagcagtttgtggcccttttgtggaagaggtggctgatcgctagg
cgtagcaggaagggattttttgctcagatcgttctgccagcagtatttgtctgtattgcc
cttgtgttcagtctgattgttcctccttttggcaagtaccccagtctggaactgcagccg
tggatgtacaatgaacaatacacatttatcagcaatgacgctccagaagatgcaggcact
caaaaactcttggatgctctgaccaagagccctggttttggtactcgttgtatggaagga
caatcaattccggatgtgccctgtgagggtggtgaggataaatggactactgcctctgtc
cctgagtccgtgatggacatcttccggaaagggaactggacaatggagaacccttcacct
gcctgtgagtgcagtagtgacaagataaagaaaatgctccctgtatgtcccgctggtgca
ggtggattgcctcctcctcaaagaattcaaaatacatctgacatccttcaaaacttgact
ggaagaaacatttcagactatctggtgaagacctatgtccagatcatagcaaaaagccta
aagaacaagatctgggtaaatgaatttaggtatggtggtttttctctgggtaccagtaac
gtgcgtggattacctccaagtaatgaaattaatgttgccattgaccaagtgaagaaactc
tttcagctgaccaaggatagttctgcagatcgatttctcaacagcttaggaaacttcatg
acaggactggataccaaaaataatgtcaaggtatggttcaataacaagggttggcatgcc
attggctccttcctgaatgtcatcaataatgccatcctcagagccaacctgccagaggga
aagaatcccaaccactacggcattacagcttttaatcaccctctgaatctgaccaagcag
cagctctccgaagtggccctgatgactacttcagtagatgtccttgtttccatctgtgtg
atctttgcaatgtccttcgtcccagccagctttgttgtgtttttgatccaggagcgcgtc
agcaaagctaaacatctacagttcatcagtggtgtaaaacctgtcatctactggctttcc
aactttgtctgggatatgtgcaattatgtggtacctgccaccttagtcatcatcatcttc
atctgcttccagcaaaagtcttatgtgtcttccaccaaccttcctgtcctggctcttctc
ctcttactttatgggtggtcaataacccctctcatgtacccagcctcctttgtgttcaag
atccccagcacagcttacgtggtccttactagtgtgaacctcttcattgggattaatgga
agtgtggccacttttgttttagagctcttcactaacaataagctcaacaatattaatgat
attttgaagtctgtttttctgatattccctcacttctgtctgggccgaggactaattgac
atggtgaaaaaccaggcaatggctgatgcactagaaaggtttggagaaaaccgttttgtc
tctccactctcctgggacttggtgggaaggaatctctttgctatggctgtggaaggggtg
gtcttcttccttatcactgtactgatccagtacaggttcttcatcaagcccagacccata
attgcaaaacttcctcctctaaatgatgaggatgaggatgtgagaagagaaaggcagagg
atattggatggtggtggacagaatgatattctagcaatcaaagaactaactaaggtctat
agaagcaagaggaaacctgcagttgacaggatctgtgttggcatccctcctggagagtgc
tttgggcttctgggagtgaatggggctggaaaatcatcaacttttaaaatgttaactgga
gacaccagtgtgacaaaaggagatgcttttctcaataaaaacagtatcttgtcagacatc
caagaagtccatcagaacatgggctattgccctcagtttgatgctatcactgaactgatg
acaggaagagagcacgtggaattctttgcgctcttgagaggagtccctgagaaagaagtt
ggcaaggttggcgactgggcaattcgaaaactaggccttgtgaaatatggagaaaaatat
gctgggaattatagtggtggcaacaagcgaaaactttcaactgctattgctttgattgga
gggccgccagtggtgtttttggatgagccaaccactggcatggatccaaaagcccgtcgc
ttcttatggaattgtgccctaagtgttatcaaggagggaagatctgtagtgcttacgtct
cacagcatggaagaatgtgaagctctctgtaccagaatggcaatcatggtcaatgggagg
ttcagatgtcttggcagtgtccagcacttaaagaacagatttggagatggctatacaata
gttgtacgaatagcaggctcaaatcctgacctgaagcctgttcaggaattctttggagta
gcctttccaggaagtgtcctcaaagagaaacatcggaacatgcttcaatatcagcttcca
tcttccctgtcttccctggccaggatattcagcatcctttcccagaacaaaaagagactc
cacatagaagattattctgtttctcagacaacacttgaccaagtatttgtaaactttgca
aaggaccaaagtgatgatgaccacttaaaggacctgtcattgcacaaaaatcaaactgtt
gtagatgttgcaattctcaaatcttttctgcaagatgacaaagtgagagaaagctatgtc
taa
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