Antechinus flavipes (yellow-footed antechinus): 127541989
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Entry
127541989 CDS
T08818
Name
(RefSeq) protein transport protein Sec24B isoform X1
KO
K14007
protein transport protein SEC24
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127541989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127541989
Membrane trafficking [BR:
afz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127541989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Sen15
S6OS1
Motif
Other DBs
NCBI-GeneID:
127541989
NCBI-ProteinID:
XP_051823349
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Position
6:complement(133504983..133599797)
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AA seq
1237 aa
AA seq
DB search
MSAPAGAPHPHATASARIPPRLRAAAAPTGPNQAQHYQNGPAQNQMQFPSGYGLHPQGYV
VPSGLYSQGPGKSIPLPLESQYGTDYYSGHYTVPTQNMTLATGPSTVNMQLGSQQVYGRD
PPTSHTVGCTPGSFPGSVASSTSHLHTGRPQPSFGNHYNSPVIPSANSSIASQGFPLTSG
HYAMSTASGAVYPSVSYPSVPAGDPYGQVFTSQSTSVITQFKDNSFPGQNTNVSHPPQQQ
SPVGYNTSSWATPGLQSTQDNLTQNHIGSLATSGNPSNAVADSSSCLGKQNVQLNKTSPA
PPTVSSENVSAKIQPIADQATEPIASGTQPPELLLQEGMQFGGYVNNQASSAPTPSSSTS
DDEEEEEEDEEAAIDSSSTTSSASPVPNSFDVLEGGNYPGDTVDTLSSSPSSPAPALSVS
QATKPAKPFGYGYPALQPGYQNVGLSSGAQPSNPGYSGFQQYAQQYPGMNQLSSSLSGLS
LQHSSQQPESLRPVNLTQDRNILPVTPVLAPVPNLNSDLKKLNCNPDSFRCTLTNIPQTQ
ALLNKAKLPLGLLLHPFRDLTQLPVITSSTIVRCRSCRTYINPFVSFIDQRRWKCNLCYR
VNDVPEEFMYNPLTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNAV
EAGYLTIVCQSLLENLDKLPGDSRTRIGFITFDSTIHFYNLQEGLSQPQMLIVSDIDDIF
LPTPDSLLVNLHESKELIKDLLNALPNMFTYTRETHSALGPALQAAFKLMSPTGGRVSVF
QTQLPSLGAGLLQSREDPNQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQY
SDLASLACMSKYSAGCIYYYPSFHHTHNPSQAEKLQKDLKRYLTRKIGFEAVMRIRCTKG
LSIHTFHGNFFVRSTDLLSLANINPDAGFAVQMSIEENLTDTSLVCFQTALLYTSSKGER
RIRVHTLCLPVVSSLADVYAGVDVQAVICLLANMAVDRSISSSLSDARDALVNAVVDSLS
AYSQTSSTSQQSALIAPTSLKLFPLYVLALLKQKAFRTGTSTRLDDRVFAMCQMKCQPLV
HLMKIIHPNLYRIDKLTDEGAVHVNDRIVSQPPLQKLSAEKLTREGAFLMDAGSIIYIWI
GKSCDNNFIKDVLGYPNYASVPQKLTHLPELDTLSSERTRSFLSWLRDNRPLSPVLHVVK
DETPAKTDFFQHLVEDRTEAAFSYYEFLLHVQQQICK
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccctgctggcgccccgcatccccacgctaccgctagcgccaggatccctccc
cggctcagagctgcggccgctcccaccggcccgaaccaggcccagcactaccagaacggt
ccagcacagaatcagatgcagtttccctctggatatggattacatcctcaaggatatgtt
gttccctcaggactatactcccaaggacctgggaaaagtattcctctgccattggaaagc
caatatggtactgattattattctggtcactacacagtaccaacacaaaatatgactctt
gctacaggtcctagcacagtgaacatgcaactgggatcacagcaagtatatggcagggat
cctcctacttctcatactgtagggtgcactcctggatcattcccaggtagtgttgcatct
tcaacatcccatttacacacaggtagaccccagccctcctttggtaatcactacaacagt
ccagtcattccctctgccaattcttccattgcttctcagggatttccccttacttctggt
cattatgctatgtctactgcttcgggtgctgtgtaccctagtgtttcatatccttcagtg
cctgctggtgatccatatgggcaagtatttacttcacagagtacttcagttatcacacag
tttaaagataattcatttcctggtcaaaacacaaatgtcagccatccaccgcagcagcag
agtcctgtgggttataatacttcatcatgggcaactccaggccttcaatcaacccaagac
aaccttactcaaaatcacattggatccctggctacatcaggcaacccatccaatgcagtt
gcagattcttcatcctgtcttggaaagcaaaatgttcagctaaacaagaccagtccagca
ccacccacagtttcatcagagaatgtttctgcaaagatacagcctatagcggaccaggca
actgaacctatagcctcagggacacagcctccagaactcttactacaggaaggcatgcag
tttggtggatatgttaataatcaagctagctctgcaccaactccctcgtcatcaacttca
gatgatgaggaagaggaggaggaggatgaggaagcagctattgacagttcctctacaact
agcagtgcttctcctgtgcccaacagttttgatgtcctagaaggtgggaactatccaggt
gacacagtggatacgctttcttcatcacccagcagtccagctcctgctctctctgtttct
caggcaacaaaacctgctaaaccctttggctatgggtatccagctcttcagcctggttat
cagaatgtagggctgagttctggagcacaacctagtaacccaggatattctggattccag
cagtatgctcagcagtatcctggtatgaatcagttgtcatctagtctaagcggattaagt
ctccaacattcttctcagcaaccagaaagtctgagaccagtaaacctcactcaagatagg
aatattctgcctgtgactcctgttctggcccctgtgcctaatttgaattcagaccttaaa
aaattaaattgtaatcccgattcatttcggtgtactctgacaaatattccacagactcag
gctttattgaataaagctaaacttcctttagggttgttgttgcatcccttcagagatctc
acgcaattaccagtgataacatcaagtaccattgtgaggtgccggtcttgcaggacatac
atcaacccatttgtgtctttcattgatcaaaggagatggaaatgcaatctatgctacaga
gttaatgatgttcctgaggaatttatgtataatccccttacccgttcctatggagagcct
cacaaacggcctgaggttcagaattcaactgtggaattcattgcttcttcagactacatg
cttcgtcctcctcagcctgcagtatatttatttgtcttagatgtatctcataatgcagtg
gaagcggggtatttgacaattgtctgccagtcgctattggaaaatctagacaaactgcct
ggagattcaagaacaagaattgggttcataacctttgacagtacaattcatttctataat
ttacaagaaggattatcacagcctcagatgttgattgtctcagacatagatgatatcttc
ttacctacacctgatagtttacttgtaaatctacatgaaagcaaagagctgataaaagac
ttattgaatgctttaccaaatatgttcacctatacaagagaaacccatagtgctcttggt
cctgcacttcaggctgcctttaaattaatgtctccaacaggtggccgtgtgtctgtattc
cagacacagttaccttccttgggtgcaggactcctgcagtccagagaagatcctaatcag
agatccagtacaaaggttgtgcaacatcttggtcctgcgactgatttttataagaaattg
gcattagactgttcagggcaacagacagcagtggacttgttccttttaagttcacagtat
tctgatctggcttctctagcttgcatgtccaagtattctgcaggttgcatctattattac
ccatcttttcatcatacccacaatccttcacaagcagaaaaattgcaaaaagatctaaaa
cgttatctcacaagaaaaattggatttgaagcagtcatgagaataaggtgtacaaaaggt
ctttcgatacacactttccatggaaattttttcgttcgatctactgatttgctttccctt
gccaacatcaaccctgatgctggatttgcagtacagatgtcaattgaagaaaatctaaca
gatacttctctagtgtgttttcaaactgctctattatatacctcaagcaaaggtgagcgg
aggattcgggtacacactctttgtttgccagtagtgagttcattggcagatgtttatgca
ggagtagatgtacaagcagtcatctgccttctagcaaacatggctgtggatcgatcaatt
tcatcaagtttatcagatgcaagagatgccttagtgaatgctgtggtggattccctctct
gcatacagccagacctcttccacttcgcaacagtctgctttaatagctcccacctccctc
aagctatttcctctgtatgttttggcacttctcaaacagaaagcatttagaactgggact
agcacccgcctagatgatcgtgtgtttgccatgtgccagatgaagtgtcagccacttgtt
catctgatgaaaattattcatcccaatctgtatagaatagacaaactgactgatgagggt
gcagtacatgttaatgacagaatagtgtctcagccacctcttcaaaaattgtctgcagag
aagctgacaagagaaggcgccttccttatggatgctggttccattatttacatctggatt
gggaaaagctgtgacaataacttcataaaagatgtgctcggttacccaaactatgcatca
gtaccacagaaactgacacatcttccagagttagatacgctttcttcagaaagaaccagg
tcctttctttcctggcttagagacaataggccattgagtccagttctccatgtggtaaaa
gatgagactcctgccaagacagacttcttccagcacttagttgaagaccggacagaggct
gcattttcttactatgaatttttgcttcatgttcaacagcagatttgtaaatga
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