Antechinus flavipes (yellow-footed antechinus): 127541998
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Entry
127541998 CDS
T08818
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afz04121
]
127541998
Enzymes [BR:
afz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127541998
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
U-box type E3
127541998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
127541998
NCBI-ProteinID:
XP_051823381
LinkDB
All DBs
Position
1:331605795..331642289
Genome browser
AA seq
1824 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVMTSKSRTILETPFRSRTEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAGR
LLFHKLGTMGHKQIDTYFWNRGDVYGAAATQITHLREAYAIGKKEKPPFLPEEPSSSSEE
DDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDAL
IANKFLRQAVNNFKNETGYTKRLRKQIPPPPPPIPPPRPLIQRNLQPLMRPPISRQQDPL
MIPVTSASTHAATSISSSMTPNQSSLSSAVPINQPSTPAPVPDITATVSISVHSEKPDGP
FRDPDNKIIPAAALVSDHPKASSSIAISALMEEKGYQVPVLGTPSLLGQSLLHGQLIPTT
GPVRINAARSAGGRPGWEPSINRGRHHGERSQRTQGPSLPATPVFVPVPPPPLYPPPPHT
LPLPPGVPPPQFPPQFPPGQPPPAGYSVPPPGFPPAPANLSTPWVSTAVQTAHSNTIPTT
QAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRSFSRSKSPYS
GSSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSH
GYHRSRSRSPPYRRYHSRSRSPPVFRGQSPNKRNIPQGETEREYFNRYREVPPPYDIKAY
YGRNVDFRDPFEKERYREWERNYREWYEKYYKGYAAGAQPRPPANRENFSPERFGPLGNR
RENSPFARGRREDYSNVQGHRSRNIGGSYPEKLSARDGHTMKDNAKSKEKESENPPGDGK
GNKHKKHRKRRKGEENEGFPNTELLESSRKQREPVGGEDIKTDSLFILPSRDDATPVRDE
PMEAESITFKPVSEKEKKEKDKPKAKGDKTKRKNEGTTSSKKESTAKPVKASQEKVDVER
EKSPRSEPPSKKAKEEVPKTENTKSSSQKDEKTISTPRKAHPKMTKEHQETKSIKEEKAK
KEYSKDAKQEKLANKEEKSKKTNEKSKPADAKPEKRKRKAEEKGVDKEHETLSLKNSKPE
VAEMMKPSPKRKIEPDVEKTDRTPEKDKTVLTAPAKKIKLNRETGKKIGSGENLPNAKEL
TEKLEPTSSKIKQEKVKGKVRRKVTTTEGSSSTLVDYTSTSSTGGSPVRKSEEKTDTKRT
VIKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDIKSTQAVSTVGKPASVIKN
VSTKPSNPVKHTEKESEPSEKVQKPPKEVSHEGIQHEAKSSKTCSSSEKGKTKDRDHSVS
DKDNSEKRKSSIQTEKDTSVDRINDQGNFKSLSQSSKDTRTSDKHDSGRGSSSKDFTPNR
DKKVDYDNRDHSGSKRRDERSDLTRRKDSPSRTKTESSLGQKNKLKDERTDLPKKGVGES
KRGNSSPSKDRRPYDHKVAHDSKRSNDDNKSVDKNPVKEREKHISETKNNKEKELSGNKL
FCRHSSPDTQIEKEHVTGQNDKTVVKPKPQLSHSSRLSSDLTRETDEAAFVPDYNESDSE
SNVSAKEEETLGKNPKELKDKVAEKAKENLDTTVVAQIGVRSQSQSSPSVSRSRSHSPSG
SQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHTGTELELEKSQKHKHKKK
KSKKSKDKEKEKEKDDQKVKSVTV
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcctccaaactcaactatgataccgttacctttgat
ggactgcacatctccctgtgtgatttgaagaagcaaatcatggggagagagaaactcaag
gctgctgactgcgatctacagatcaccaatgcacaaacgaaagaagaatacacagatgac
aatgccctgattcccaagaattcatcagttattgtaagaagaattcctattggaggtgtt
aagtctacaagcaagacatatgttatgacttccaaatcgcgcacaatcctagaaactcct
ttcagaagtcgaactgaaccagtgagtggaacctcaaaagcaattgatgactcttctgcg
tctatttctctggcccagcttacaaagactgccaatctggctgaagccaatgcttctgaa
gaagataaaattaaagcaatgatgtcacagtctggccacgaatatgatccaatcaattac
atgaagaaacctctgggtcctcctccaccatcttatacctgtttccgttgtggtaaacct
ggtcattacataaagaattgcccaacaaatggggataaaaactttgaatcagttcccagg
attaaaaagagtactggaattcctagaagttttatgatggaggtgaaagaccctaacatg
aaaggtgccatgcttaccaacactggaaaatatgcaatcccaactatagatgctgggaga
ctcctctttcacaaattgggaacaatggggcataagcaaattgatacttatttctggaat
cgtggtgatgtctatggagcagctgcaacacaaataacacacctaagagaggcatatgcc
atagggaagaaagaaaagccacctttcctaccagaggaaccatcctcttcatcagaagag
gatgaccctataccagatgaattgttatgtctaatctgcaaagatataatgactgatgca
gttgtcataccttgctgtggaaacagttattgtgatgaatgtataagaacagcattgcta
gaatcagatgaacatacatgtccaacttgtcatcagaatgatgtatctcctgatgcttta
attgccaacaaatttttacgccaggctgttaataacttcaagaatgaaactggctatact
aaaagacttcgaaagcagataccaccaccaccacctccaattccacctccaagaccactg
attcagcggaacctacaacctctaatgagacctccaatttcaagacaacaggacccttta
atgattccagtgacatctgcatctactcatgctgctacttctatatcatcatccatgact
cctaatcagtcttccctatcatctgctgtacctataaatcagccttctactccagcacca
gttcctgatataactgccacagtgtctatatctgtccattcagaaaaacctgacggacct
ttccgtgatcctgataataaaattatacctgctgcagccttagtatcagaccatcctaaa
gcttcttcatcaatagcaattagtgcactaatggaagaaaagggctatcaggtgcctgta
cttggaacaccttctttgcttggacagtcccttttgcatggacagttgatacctacaact
ggtccagtaagaataaatgctgctcgttctgctggtggtaggcctggttgggaaccaagc
ataaatcgaggacgacaccatggtgaacgttcacaaaggactcaaggcccgtcactacca
gcaacacccgtctttgtacctgtaccaccacctcctttgtatccaccacctccccataca
cttcctctccctccaggtgttcctccaccacagtttcctccacagtttccacctgggcaa
ccaccacctgctggctacagtgtccctcctccaggtttccctccagctcctgcaaattta
tcaacaccttgggtatcaactgcagttcaaacagctcattcaaatactatcccaacaaca
caagctccacccttatccagggaagaattctacagagagcaaagacgactaaaagaggag
gaaaagaaaaagtccaaactagatgagtttacaaatgattttgctaaggaattgatggaa
tacaaaaagattcaaaaggagcgtaggcgctcattttcaagatctaaatccccatatagt
ggctcttcttattcaagaagttcatatacctattctaagtcaagatctggttcctcacgt
tcacgttcctattctcgatcttttagtcgttcacattctcgttcttattcacgatcacct
ccatatcccagaagaggaagaggaaaaagtcgaaattatcgttcaagatccaggtctcat
ggatatcaccgctccaggtcaaggtcacccccgtatcggcgataccattcacgatcaagg
tctcctccagtttttagagggcaatctcctaataaacgaaatataccccaaggagaaaca
gaacgtgaatacttcaacagatacagagaagttccaccaccatatgatataaaagcttac
tatggtaggaatgttgactttagagacccatttgaaaaagaacgttacagagaatgggaa
agaaattacagagagtggtatgaaaaatattacaaaggttatgctgctggagcacagcct
agacctccagcaaatagggagaatttttctccagagagatttggaccattgggcaacaga
agagagaattctccctttgctcgaggtcgcagggaggattattctaatgtacagggtcat
cgaagtcgcaatataggtggcagttacccagaaaagctttcagcaagagatggtcacacc
atgaaggataatgccaaatcaaaagagaaggagagtgaaaatcctccaggagatggaaag
ggaaacaaacataagaaacatcgaaagagaaggaagggggaagaaaatgaaggctttcct
aacacagagttattagagagttctagaaaacaaagagaacctgtaggtggagaagatatt
aaaacagactccctgttcattctccccagtagagatgatgccactcctgttagagatgaa
ccaatggaggcagaatcgatcacttttaaacccgtatcagaaaaggaaaagaaagaaaaa
gacaaaccaaaagcaaaaggtgacaaaactaaacgtaaaaatgaaggaactactagttcc
aaaaaagagagcactgcaaaacctgtcaaagcatcccaggaaaaagtggacgtagaacgt
gaaaagtctccaagatctgaaccaccatccaaaaaagccaaagaggaggtgccaaagaca
gagaatactaaatcctcctcccaaaaagatgaaaagaccattagtacacccagaaaagct
caccccaagatgacaaaggaacatcaagaaactaaatccatcaaggaggaaaaagctaaa
aaggaatattcaaaagatgccaaacaagaaaaactagctaacaaggaggaaaagtcaaaa
aagactaatgagaaaagtaagccagctgatgccaagccagaaaaaagaaaaagaaaagct
gaagaaaagggtgtagacaaagaacatgagactttgtcattgaaaaactctaaaccagaa
gttgctgaaatgatgaagccatcaccaaagcgcaaaattgagccagatgttgagaaaaca
gataggaccccagaaaaagacaaaactgtgttaactgccccagccaaaaagataaaactc
aacagagaaacagggaaaaaaattggaagtggtgaaaacctgcccaatgcaaaagaactc
actgaaaaattggaaccaacttccagtaaaattaaacaagaaaaagttaaagggaaagta
agaagaaaagtaacaaccactgaaggatctagctcgactcttgtggattataccagtaca
agctcaactggaggcagccctgtaaggaagtctgaagaaaaaacagacacaaaacgaact
gtcattaagaccatggaagaatataataatgacaatacagctcctgctgaagatgttatt
attatgattcaggttcctcaatcaaagtgggacaaagatgattttgaatctgaagaagaa
gatattaaatctacacaagctgtgtccactgtaggaaagcctgctagtgttataaagaat
gttagcactaagccatcaaatcctgttaaacatactgaaaaagaaagcgagccatcagag
aaagttcagaagcccccaaaagaagtaagccatgaaggtatacagcatgaggccaaaagt
tcaaaaacttgttcatccagtgaaaaaggaaaaaccaaagatcgggatcattctgtgtca
gataaggacaactctgaaaaaaggaaaagcagcattcagacagaaaaggatactagtgta
gatcgtataaatgatcaaggaaattttaaaagtctttctcaatcatccaaagacactaga
acttcagataagcatgattctgggcgtggatcttcaagtaaagactttacccctaataga
gacaaaaaagtagactatgataacagggatcactctggttccaaacggagagatgaaagg
agtgacttaacaagaagaaaagattctccttctcgaactaaaacagaatcttcattgggt
cagaaaaataaactgaaggatgaaaggacagatttgcctaaaaagggagtaggagaatca
aaaagaggcaattctagtccttcaaaggacagaagaccatatgatcacaaagttgctcat
gattctaaacgttcaaatgatgacaataaatctgtagacaaaaacccagttaaagagcga
gagaagcatatatcagaaacaaagaataataaggagaaagagttaagtggaaataaatta
ttttgtagacatagctctccagatacacaaattgaaaaagagcatgttactggacagaat
gataagactgttgtcaaacctaaaccccagttaagccactcttctagactttcttctgat
ttaacaagagaaactgatgaagctgcttttgtaccagactataatgaaagtgacagtgag
agtaatgtgtctgcaaaagaagaagaaactttggggaaaaatcctaaggaactgaaagat
aaggtggccgaaaaagctaaagagaacctggatacaacagtagttgcccaaataggtgta
agaagtcagagtcaaagtagtcctagtgttagccgaagtcgcagtcatagcccttctgga
agccaaacacgaagccacagcagcagcgctagctcagcagaaagtcaggacagcaagaag
aagaaaaagaaaaaggaaaaaaagaagcacaagaaacataaaaaacataagaaacataag
aaacacacaggcactgaattagaattggaaaagagccaaaaacacaagcataagaagaaa
aaatccaagaaaagcaaagataaagaaaaggagaaggaaaaggatgaccaaaaagttaaa
tctgtcacagtataa
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integrated database retrieval system
