Antechinus flavipes (yellow-footed antechinus): 127542084
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Entry
127542084 CDS
T08818
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afz03000
]
127542084
Transcription factors [BR:
afz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127542084
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
Phage_holin_7_1
Motif
Other DBs
NCBI-GeneID:
127542084
NCBI-ProteinID:
XP_051823531
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Position
6:206359488..206897606
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AA seq
834 aa
AA seq
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MRPLGRRMSSKQAASPFACAADGEEAMTQDLSAREKEEGGDQHVTSHLPLHPIMHNKPLP
EELPTLVTTIQQDADWDSVISAQHRMESENTKLCSLYSFRNTSTSPHKPDDGGRDREIMT
SVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNASEL
LGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQ
QEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFP
SGIPYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHASHPQISPRLKGLSERYGRNLDT
FEHGGGQSYNHKKIEQLYAAQLASMQVSPGAKMPSTPQPPTTAGAVSPTGMKNEKRGTSP
VTQVKDEAAQPLNLSARPKTAEPAKSPTSPPQSLFPASKTSPVNLPNKSGIPSPIRGSLG
RGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQPHGIDGKLTSMNSTGL
NNCRNEKERTHFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAVNGSAAKLQQYYC
WPTGGATVAEARVYRDARGRASTEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI
LGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLM
RSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLP
VIQSTYGMKTDGGSLAGNEMINGDDDMEMYDDYEDEPKSDYSSENEGPEAVSAN
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgagaccattaggaagaagaatgtcttccaagcaagccgcctctccatttgcctgtgca
gctgatggagaggaagcgatgacccaggatttgtccgctcgggaaaaggaagagggcggt
gaccagcacgtgacctcccatctgcctcttcaccctatcatgcacaacaaacctctccct
gaggagctaccaactcttgtcaccaccattcaacaagatgctgactgggacagcgtcatc
tcagcccagcacagaatggaatcagagaatactaagttatgttccctctattccttccga
aatacctctacctcaccacataagcctgatgacgggggtcgggaccgagagataatgacc
agtgtcactttcggaacgccagagcgccgcaaagggagcttggcagatgtagtagacaca
ttgaaacaaaagaagttggaagagatgacccggactgagcaggaggactcatcctgcatg
gaaaaactactttcaaaagactggaaggagaaaatggaaagattaaatgccagtgagctt
cttggagaaattaaaggtacccctgagagtctggcagagaaagaacggcagctctccacc
atgatcacccagctgatcagtttacgggagcagctcctggctgcacatgatgaacagaaa
aagctagcggcctcccagatagagaagcagcggcagcagatggacctagctcgccagcag
caagagcagattgcgaggcagcaacagcaacttctgcaacagcagcacaaaatcaatctc
ctgcagcagcaaattcagcaggttcagggtcacatgcctccgctcatgatcccaattttt
ccacacgaccagcggacactggcagcagctgctgctgcccaacagggattcctcttcccc
tctggaataccgtacaaaccaggtgataactaccccgtacagttcattccatcaacaatg
gcagctgctgctgcttctggactgagccctttacagctccagaaagggcatgcctcccac
ccacaaattagcccaagactaaagggcctaagtgaacgttatggcaggaatttggatacc
tttgaacatggtggtggccagtcttacaaccacaaaaagattgagcagctctatgcggcc
cagctggccagcatgcaggtgtcacctggcgcgaagatgccgtctactccgcagccacca
accacagcaggggcggtctcacctactgggatgaaaaatgaaaagagagggaccagccct
gtaactcaagttaaggatgaagctgcacagcccctgaatctctcagcccgacccaagact
gctgagccggcgaagtccccgacatctcccccgcagagcctcttcccggccagcaaaacc
agccccgtgaacctgcccaacaagagcgggattcccagccccatccggggaagcctgggg
agaggatcctctttagatatcctgtccagtctcaactcccctgccctatttggggaccag
gacacggtgatgaaagccattcaggaggctcggaagatgagagaacagatccagcgggag
cagcaacaacagccccacggcatagacggcaagttgacctccatgaatagcacgggcctc
aacaactgcaggaatgaaaaggaaagaacacactttgaaaatctgggcccccagttaaca
gggaaatcaaatgaagatgggaaactgggcccaggagtcattgatctgacccgacccgaa
gatgcagagggaagtaaagccgtgaatggctctgcagctaaactacagcagtattattgt
tggccaacaggaggtgccacggtggctgaagcccgagtctacagggatgcccggggtcgg
gctagcaccgaaccacacatcaagcgaccaatgaatgctttcatggtttgggcaaaggac
gagaggaggaaaatccttcaagccttccctgatatgcacaactccaacattagtaagatt
ctaggttctcgctggaaatccatgtccaaccaagagaagcaaccgtattatgaagagcag
gcccggctaagcaagatccacctagagaagtacccaaattacaagtataaaccccgacca
aaacgcacctgcattgttgacggcaaaaaactccgcatcggagagtacaaacagctgatg
aggtctcggagacaggagatgagacaattcttcactgtagggcaacagcctcagattccc
atcactacaggaacgggtgttgtgtatcctggtgctattaccatggcaactaccacccca
tctcctcagatgacgtctgactgctccagcacctcggccagcccggagcccagcctgccg
gtcatccagagcacttacggcatgaagacggacggcgggagcctggccgggaacgaaatg
atcaacggcgacgacgacatggaaatgtacgacgactacgaagatgagcccaaatcagac
tatagcagtgaaaacgaaggtcccgaagccgtcagtgccaactga
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