Antechinus flavipes (yellow-footed antechinus): 127542120
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Entry
127542120 CDS
T08818
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04360
Axon guidance
afz04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127542120
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
127542120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
V-set
LRR_14
LRR_9
Ig_2
LRRNT
LRR_LRWD1
Ig_6
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
127542120
NCBI-ProteinID:
XP_051823619
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All DBs
Position
6:complement(234303519..235699408)
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AA seq
640 aa
AA seq
DB search
MLNKMTLHPQQMMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPSNLKGRYIGELDQNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTLQD
TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTENNVGPTP
VIDWETTNVTTSLTPQSTRSTEKTFTIPVTDINNGIPGIDEVMKTTKIIIGCFVAITLMA
AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPIESHLPMPAIEHEHLNHYNS
YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagatgatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctcctggctctccaactcctagtggtggccggt
ctggtgagggcccaaacctgtccttctgtatgctcctgcagtaaccagttcagcaaggtc
atctgtgtgcggaaaaatctcagagaggtccctgacggcatctctaccaacacgcggctc
ctgaatctccacgagaatcagattcagatcatcaaggtgaacagcttcaaacacctgagg
catttggagatcctccagctgagcaggaatcacatccgtaccattgaaatcggggccttc
aatggtttggcaaacctcaacactttggagctctttgacaatcggctgaccaccattcca
aatggggcttttgtatacctgtctaaactgaaggaactctggctgcgaaataaccccatt
gaaagcatcccttcttatgcttttaaccgaatcccgtctttgcgccggttggacttagga
gagttgaagaggctttcgtacatctccgaaggggcctttgaaggtctctccaacttgagg
tatctgaaccttgccatgtgcaacctgcgggaaatcccaaacctcacgccgctcatcaag
ttggatgagctggatctttctgggaaccatttgtccgccattaggccgggctctttccag
ggtttgatgcacctgcagaaattgtggatgatccagtcacagatccaggtgattgaaagg
aatgcatttgataaccttcagtcactggtagagatcaatctggcacacaataatctgacc
ttactgcctcacgacctcttcacgcccctccatcacctcgagaggatccacctgcatcac
aacccttggaactgcaactgtgacattctgtggctcagctggtggataaaggacatggcg
ccctcaaatactgcatgctgtgcccgctgcaatacgccctccaacctgaaagggaggtat
atcggggaattggatcagaattattttacctgttacgctcctgtgattgttgagcctccc
gcggacctcaacgtcacagagggcatggcggcagaactcaagtgtcgggcttccacctcc
ctgacctccgtctcttggattactcccaatgggacggtcatgactcacggagcctacaag
gtccggattgctgtgctcagcgatggcacattaaattttactaatgtaactctacaagat
acaggcatgtatacatgcatggtgagtaactctgttgggaataccacagcttcagccacc
ctgaatgtgaccgcagccaccactaccccattctcgtatttttccaccgttaccgtagag
actatggaaccttctcaggacgaggctcggaccacggagaacaatgtggggcccaccccg
gtcattgactgggagaccaccaatgtgaccacctctctcacgccccagagcacaaggtcc
accgaaaaaacattcaccatccctgtgaccgatataaacaatggcatcccgggaatcgat
gaggtgatgaaaaccacgaagattatcattggttgctttgtggccatcacgctcatggca
gccgtgatgctggtcatcttctacaagatgcggaaacagcatcatcggcaaaatcaccac
gcccccacgcggactgttgagatcattaatgtggatgatgagattacaggggacacaccc
atagagagccacttgcccatgcctgctatagaacatgagcacctaaatcactataactct
tacaaatctcccttcaaccacacaacaacagttaacacaataaactcaatacacagttca
gtgcatgaaccgttgttgattcgaatgaactcaaaagacaatgtacaagagactcaaatc
taa
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