Antechinus flavipes (yellow-footed antechinus): 127542702
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Entry
127542702 CDS
T08818
Name
(RefSeq) cleavage stimulation factor subunit 3-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127542702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127542702
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
127542702
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_16
TPR_19
NRDE-2
TPR_6
Motif
Other DBs
NCBI-GeneID:
127542702
NCBI-ProteinID:
XP_051824428
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Position
X:36808113..36810257
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AA seq
714 aa
AA seq
DB search
MSSNGVTDVVAEYVPEKVKKAEKKLEENPYDLSAWSILIREAQNHPIEKARKTYERLVAQ
FPSSGRFWKLYIEVEVKSKHFDKAEKLFQRCLIKVLHIDLWKCYLSYVRENKSKLPSYKE
KMAQAYDFALDKIGMEVMSYQIWMDYINFLKNVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEESINIHLAKKMIEDRSRDYMNARRVSKEYEIIMKGLDRNAPSVQPQ
NTPQEAQQVEMWKKYTQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLSHHPDVWYEAAQY
LEQSSKLLSEKGDINNARLFSNEAANIYERAISTVLKRNMLLYFAYADYEESRMKFEKVH
IIYSRLLAIKDIDPTLVYIQYMKFARRAEGIKSGRVIFKKARQDTRTRHHIYVSAALMEY
YCTKDTLVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWAKFLAFESSNGDLTSIMKVEKRRFTAFKEEYESKETALLVDRYKFMDLYPSSASE
LKALGYKDMSRIKLATIPDPVETPSTMPDLKDETRKPEYPKPDVQQMLPFLPRHLAPPGL
HPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDVLMDIFRKCKIPSSVDEAVKIITGG
APGRAGEGTDPIHDSATLTKGVKRPSASVEEEEEKSPVPPLHDIYRSRQLKRMR
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcaatggtgtcaccgatgtggttgctgaatatgtcccagaaaaagtgaagaaa
gcagaaaaaaaattagaagagaatccatatgacctttctgcttggagcattttgattcga
gaggcacagaatcatcctatagaaaaagcacggaagacatatgaacgcctcgttgcccag
ttccccagttctggcagattctggaagctgtacattgaagtagaggttaaatctaaacat
tttgacaaagctgaaaaattatttcagagatgccttataaaagttttacatattgacttg
tggaaatgttatctttcgtatgtcagagaaaataagtcaaagttacccagttacaaagaa
aaaatggcacaagcatatgattttgctttagataaaattggaatggaagttatgtcttat
cagatttggatggattacatcaatttcttgaaaaatgtagaagctgttgggtcttatgca
gaaaatcaaagaataacagctgttagaagagtttatcaacgaggttgtgttaatccaatg
atcaatattgagcaactttggagggactatagcaaatatgaagagagtatcaacatccat
ctagctaaaaaaatgattgaagataggagtcgagattacatgaatgcgaggcgtgtatca
aaggagtatgaaataataatgaaaggtttagaccgcaatgccccttcagtacaaccacag
aatactccccaagaggctcagcaagtagagatgtggaagaaatacactcagtgggaaaag
agtaaccctctcagaacagaagatcagacactcataaccaaaagagttatgtttgcatat
gagcagtgcttgctggtgctaagccatcacccagatgtttggtatgaagctgcccagtac
ctggagcagtccagtaagctgctgtctgagaaaggggatataaataatgctagattattt
agcaatgaagctgctaatatatatgagagagctattagcaccgtattgaagagaaatatg
cttctttattttgcatatgcagattatgaagaaagtcgaatgaaatttgaaaaggttcac
atcatatacagtcgacttctggctattaaggatatcgatcctactctggtatatattcag
tatatgaagtttgcaagacgagcagagggcatcaaatctggaagggtgatatttaagaaa
gcaagacaggatactagaacacgccatcatatctatgtttctgcagcattaatggagtac
tattgtactaaggataccttagtggcctttaagatttttgagctaggattaaaaaaatat
ggtgatattccagaatatgtattagcctatattgactacctttctcaccttaatgaggac
aataatacacgagttttgtttgaacgagttctgacctctggaagcctgccacctgaaaaa
tctggagaaatatgggccaaattcctagcttttgaaagtagcaatggtgatctgaccagt
ataatgaaagtagagaaaagacggttcacggcattcaaggaagaatatgaaagcaaggaa
acggcattactggtcgataggtacaaattcatggatttgtatccttcctccgcaagtgaa
ctgaaggctcttggctataaggacatgtctcggatcaagttagcaaccattcctgatcct
gtggaaactccttccacaatgcctgaccttaaagatgaaactagaaagcctgaatatccg
aagccagatgtccagcagatgctcccctttctgccaagacatttagcacctccaggctta
catcctgtgcctggtggagtgtttccagtgccacctgctgctgtagttttaatgaaactt
cttcctcctcctgtctgtttccagggtccttttgtgcaagtggatgtgctgatggacatt
ttccgaaaatgcaagatcccaagctctgttgatgaagctgtgaagatcattactggagga
gcaccaggtcgagctggggaagggacagaccccatacatgacagcgctactctcaccaaa
ggagtcaaacgtcccagtgccagtgtggaggaggaggaagagaaaagtccagtgccacct
ctccatgatatctacagatcccgacaactcaagagaatgcggtga
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