Antechinus flavipes (yellow-footed antechinus): 127543044
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Entry
127543044 CDS
T08818
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
127543044
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afz01009
]
127543044
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afz04515
]
127543044
Protein phosphatases and associated proteins [BR:
afz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127543044
Cell adhesion molecules [BR:
afz04515
]
Cadherins
Protocadherins
127543044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
FctA
Cadherin_4
He_PIG
Motif
Other DBs
NCBI-GeneID:
127543044
NCBI-ProteinID:
XP_051824972
LinkDB
All DBs
Position
X:69206662..69783651
Genome browser
AA seq
1301 aa
AA seq
DB search
MVSFSGTCLFILLLACIIFQCDAQEKNYTIREELPENVLIGDLVKDLGLTFSPEKKLSTP
LQFKLVYKSRDLPLVRVEETTGEIYTTGVRIDREKLCSGVFGETHCFYEVEVAVLPDEIF
KLVKVRFLIEDVNDNAPLFPATVINISIPENTAINSRYPIPSAFDPDVGINGIQQYHLIK
GLDVFGLDVIETPEGEKWPQLIVQKMLDREEKDMYVMKLKVEDGGSPTRSSTAILQVSVI
DMNDNRPIFQETEVEVAIPENAPVGSSVYQLHATDADVGANARIQYFFSNLMNQVARKLF
SLNNTTGLITVKEPLDREQAPIHKLMVVATDGGPMPARAMVIVNVTDVNDNPPIIDVRYI
IDTTNGTVFLSENAALNTKIALITLIDKDADRNGRVTCFTEYDVPFRLRPVFENQFLMET
SSFLDYETTKEYEVKLMASDAGKPPLNYTTSVFVKVKDENDNAPIFRQSSIGISVPENNA
PGAQLTKISATDADTGKNGEITYLLAGEPPSAFSLDNRTGILSAVEQLDRETKDKYTFTV
TARDNGVPHLQSNATVTVTVLDQNDNSPTFTHSEYNFYVPENLPKHGTVGLITITDPDAG
ENGVITLTILNNNGSFIIDSIHGVIRPNISFDREKQESYSFIVMATDGGKVPRSSSAKVT
INVVDINDNKPVFILPPTNYTFEFVPLATEIGTLLYVVMAIDEDTGMNAEIRYHIEGGNK
KKLFQMEGASGNITLKSRFIPADQGLHKLLIKARDLGQPDSMNSKILLNLFVNDTLYNST
FVDELLRRNRGRSVTHKVRKTDVASPSSSEYIKYIIAIISGSMTAVLTIVIAALLRCRRF
PRLKGARKQNSEWVTPNPENSEAITISTSNNSGPNNVILNLVSFAESGNEELENEEEEVT
TSLDVVIDIEEDTMAKYNWGTHSSTFKPDGPDLAQHYKATSPQPTFHIEPETPMHSKHHG
IQVLPVDNTFVLSCDSLSKCSSSGSDPYSISDCSCQGTIKTTATIHPRQAANELGITDSA
LKDPNVITIRTYPMHLMPAARPRTPLREPAIQETPVDLWIPSQRKLEPKKPGKAQRRVTF
HLPESFHENNSHNVPFEAEAGATASARPGYARREYPERTTTTHSNRTEGDGNSDPETACI
SGLKKASEITVQPTLEEASDNCTQECLILGHSDSCWMPAAVPQYQQPRSPEPVVTRHSSP
ASHLITTTAMCHNPPEPQAAAICTTPPRALSQELGLGARFEARDAQGRVVVQDDSNLARR
CSPRALFCTAEHDDSIRVIPMTTFTPGQPSRGSPNTEEDPM
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggtatctttttctggaacttgcttgttcattctcctgctggcttgtatcatatttcaa
tgtgatgcgcaggaaaagaattacaccataagagaagagttgccagaaaatgttctgata
ggtgacctagtgaaagatctcggtctgacgttctcgccagagaagaagctttcaactccc
ttgcagtttaagttagtgtacaagagtagggatctgccattggtgagggtagaagagaca
actggtgagatctatactaccggtgtacgtatagatcgtgaaaaattatgctctggtgta
ttcggtgaaactcactgtttttatgaagtagaagtagctgttttgccagatgaaatcttt
aaactggtcaaggtccgtttcctgatcgaagatgtcaatgataatgcaccactgtttcct
gcaacggtcatcaacatttcgattcctgagaacactgctatcaattcccgatatccaata
ccttcagcctttgatcctgatgttggcattaatggaattcaacaataccatctgattaag
ggtttagatgtttttgggcttgatgtcattgaaacacctgagggagaaaaatggccccaa
ctaattgtccaaaagatgctggatcgggaggagaaagacatgtatgtgatgaaattgaaa
gtcgaagatggtgggtcacctacaaggtccagcacagccattttgcaagtttctgtgatt
gacatgaatgacaaccgtcccatctttcaggagacagaggttgaagttgccatccctgaa
aatgctcctgtgggctcttcagtctatcagctccatgccactgatgctgatgtgggtgca
aatgcacggatccaatacttcttcagcaatctgatgaaccaggttgctagaaagcttttc
agtctcaacaataccactggcctcattactgtcaaggagcccttggacagggagcaggca
cctattcataagttgatggttgtagcaaccgatggaggtccaatgccagctagggccatg
gtaatagtcaatgtcaccgatgtcaacgacaaccccccaataattgacgtcagatacatc
atcgatacgaccaacgggactgtatttttgtcagaaaatgctgcactcaacactaaaatt
gccctaattacactaatagacaaagatgctgaccgtaatggtagagtgacctgtttcaca
gagtatgatgttcctttcagattaaggccagtttttgaaaatcaattcctgatggagact
tcctctttcctagactatgagactacaaaagaatatgaagtaaaattgatggcttcagat
gctggcaaacctcctttgaattatacgacttctgtttttgtcaaagtcaaagatgaaaat
gacaatgcacccatcttccgccagtccagcatagggatttctgtcccagagaacaatgct
cctggtgctcagctgacaaaaattagcgcaactgatgcagacactggaaagaatggagag
atcacttacctgttagctggtgaacctccctctgctttcagcctggataatcgtacaggc
attctgtcagcagtggaacaactggatagagaaacgaaagataaatataccttcacagtc
actgcaagggacaatggggtgcctcacctgcagtccaatgctacagtgactgtaacagtc
cttgatcaaaatgacaacagccctactttcacccacagtgaatacaacttctatgtccca
gaaaacctgcccaaacatggcacagtgggactcatcaccataactgatcctgacgctgga
gaaaatggagttatcactctcaccattctaaataacaatggtagcttcatcattgattca
atccacggagtcatccgacccaatatatcttttgatagagagaaacaagagtcttacagt
ttcatagtaatggccacagatggaggcaaggtgccacgctcttcatctgccaaggtgacc
atcaacgtagtagatattaatgacaacaaaccagttttcatcttgcctcctaccaactac
actttcgagtttgttccattagctactgaaattggcacacttttgtacgtagtaatggct
attgatgaggacactggcatgaatgctgaaatccgttaccatatcgaagggggaaacaaa
aagaaattgtttcaaatggaaggagcatcagggaacataaccctgaaatctagatttatt
cctgcagaccaaggtttacacaagctgttgatcaaagctagggacttaggacaacctgac
tctatgaatagcaaaatactcttaaacctatttgtgaacgatactctgtacaattctact
ttcgtcgatgaactgctacgcagaaatcggggaagatcagtgacccataaagttcgaaag
actgatgttgcaagcccttcaagcagcgaatatatcaagtacatcattgccatcatttct
ggttccatgactgccgtcctgaccatcgttattgctgctcttctacgatgccgccgtttc
ccgcgcctcaaaggggcaagaaagcagaattcagaatgggttactccaaatccagaaaac
agcgaggcaataacaattagtacaagcaacaatagtggccctaataatgtcatccttaac
ctcgtctcctttgccgaatctgggaatgaggagctagaaaatgaggaggaggaggtcact
acctccttagatgttgtcattgatattgaagaagacaccatggcgaagtacaactggggt
acccattcttctacttttaagcctgatggtcctgatttggcccaacactacaaagctaca
tctcctcagccaaccttccatattgagcctgagactcccatgcattcaaagcaccatggc
atccaggtgctgcccgtggacaacacttttgtgctgtcctgtgactctctttccaaatgt
tcctctagcggctcagatccatacagcatttctgactgtagctgtcaaggaaccatcaag
actacagccaccattcatccccgacaggctgcaaatgagctggggataactgactctgct
ttaaaggatccaaatgtgatcactatccggacttaccctatgcatttgatgcctgctgct
agacctcgcactccgctgagagagccggctattcaggagacccctgtggacctctggatt
ccttctcagaggaaactagagccgaagaaaccaggaaaggctcagcgtcgtgtcactttc
caccttccagaaagcttccacgagaacaacagtcacaatgtaccttttgaggcagaagcc
ggtgccactgctagtgccaggcctggctatgcccggagagaatatcctgaacgcacaact
actacacacagcaaccgtaccgaaggagacggtaactctgaccctgaaactgcttgcatt
agtggactcaagaaagcttcagagataaccgtccagccaactcttgaagaagcctctgac
aactgtacccaagaatgtcttatccttggtcattctgactcctgctggatgcctgctgct
gtgccccagtaccagcagcctcgttctcccgaacctgtcgtaacccgccacagttctcct
gcttcacatctgatcactactactgccatgtgtcataatcctccagagccccaggctgca
gctatttgcaccactccgccccgggcactgagccaagagctggggcttggtgctaggttt
gaagcaagggatgctcaaggaagagttgttgtacaggatgactctaatctggcacgaaga
tgcagtcccagagccctgttctgcacagctgaacatgatgactccatcagagttattccc
atgacgaccttcactcctggccagccttcgcggggctctcccaatactgaagaggatccc
atgtaa
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