KEGG   Antechinus flavipes (yellow-footed antechinus): 127543055
Entry
127543055         CDS       T08818                                 
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04151  PI3K-Akt signaling pathway
afz04382  Cornified envelope formation
afz04510  Focal adhesion
afz04512  ECM-receptor interaction
afz04518  Integrin signaling
afz04820  Cytoskeleton in muscle cells
afz04926  Relaxin signaling pathway
afz04933  AGE-RAGE signaling pathway in diabetic complications
afz04974  Protein digestion and absorption
afz05146  Amoebiasis
afz05165  Human papillomavirus infection
afz05200  Pathways in cancer
afz05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:afz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    127543055
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127543055
   04518 Integrin signaling
    127543055
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127543055
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127543055
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    127543055
  09154 Digestive system
   04974 Protein digestion and absorption
    127543055
  09158 Development and regeneration
   04382 Cornified envelope formation
    127543055
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    127543055
  09162 Cancer: specific types
   05222 Small cell lung cancer
    127543055
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    127543055
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    127543055
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    127543055
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afz04147]
    127543055
   00536 Glycosaminoglycan binding proteins [BR:afz00536]
    127543055
Exosome [BR:afz04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   127543055
Glycosaminoglycan binding proteins [BR:afz00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   127543055
SSDB
Motif
Pfam: Collagen C4 DUF7455
Other DBs
NCBI-GeneID: 127543055
NCBI-ProteinID: XP_051824988
LinkDB
Position
X:complement(31274699..31503547)
AA seq 1678 aa
MRAAAGTAAGLLCFLGLSQWGWPVDAAACHGCSSGPKCDCSSVKGEKGERGLPGLEGHPG
LPGFPGAEGPPGPPGQKGDDGAPGPVGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGESGFLGFSGIPGLPGPPGRPGIPGVKGQPGSIILSTVLGPKGDPGDPGLPG
RQGPAGMTGSPGPLGSPGLPGWLGPPGPPGIQGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQIGEMKRPNETELLKGDQGAPGDRGSPGLPGLRGPPGLPGGVKGEKGWPGEPGQKGKP
GRDGASGLPGMQGLPGDPGVPGKPGRGGEKGQKGDTGPTGPPGLVLPRGGTGEKGNLGLP
GLPGEKGDQGSPGAPGLPGLPGPPGPTVTGPPGPPGFPGERGEKGAKGLPGVPVPGQPGR
DGQPGAPGLPGTPGKPGPHFPSNGAVCEKGARGPPGSPGDRGVPGEQGVKGDKGDTCLNC
IEAGLPGLPGQPGLPGPPGLTGARGFPGQKGAKGNAGATGPVGSPGLPGVPGASGEPGSK
GSPGDTISFPEMKGDKGDAGLPGASGIPGLPGRPGKDGLPGLPGIKGKPGGFALKGERGP
PGKPGLPGLPGTRGPMGPPGLGPPGPVGKKGIPGMAGNPGPPGIPGAKGDPGPTISQPGP
RGLPGLPGRDGDVGLPGDPGFPGVPGLPGIPGSKGEPGRPGIGLPGPPGPKGYQGMPGPP
GTPGAPGRRGLQGPPGHPGLPGPKGEPGVGLPGPPGLKGLPGVKGTPGPKGSTGFPGLSG
NPGLPGLDGPAGPKGDPGTVGQPGFTGPSGLPGMGRPGRPGPPGVPGPLGQPGLPGDPGG
KGDPGPPGFDVSGPPGERGHPGLPGTPGVTGLQGFPGSPGRDGAPGLSGAKGEMGKLGPP
GPPGPLGIPGRSGVPGLKGENGLPGQPGFPGPVGQKGERGETGIPGPPGQLDPNYPKVKG
EKGEPGLPGVPGPFGPKGFHGHPGDPGQPGLDGQPGSPGPPGPRGNQGLPGRPGPVGPPG
LKGCIGEMGFPGLQGVQGSPGVPGVAGQPGSPGFPGQNGEKGAPGFGGIGRPGLPGPKGD
PGLPGYPGTPGSQGAPGDTGSPGAPGSPGVKGQPGLPGRPGIIGLPGPRGMDGPSGSPGI
PGQSGPIGSQGHPGPPGSPGEKGKPGQDGIPGPAGQKGEPGQPGFGFPGPPGISGFPGEK
GDEGSPGTPGSPGPQGPKGERGFPGFPGIQGPPGPPGSPGQNREGPKGNPGPRGHPGRTG
PKGPRGVPGNGRVKGKRGDPGLPGKPGLPGLKGERGPPGPQGDPGWPGFIGMKGNPGIQG
IPGSQGMKGPSGAPGSAGPAGAPGPRGPSGSPGFPGPSEKDIIIKGDIGPPGLPGLPGLK
GPVGIPGPPGLPGPTGPVGDPGRNGRLGLNGPVGPKGDPGPSGQPGNRGVEGSPGSEGLP
GLPGPPGTLSLAHGFLITRHSQTTHIPQCPQGTVQIYTGFSLLYVQGNERAHGQDLGTSG
SCLHRFSTMPFMFCNINNVCNFASRSDYSYWLSTPKPVPMTMEPLSGQSIVPFISRCSVC
EAPAMVIAVHSQTTQLPYCPQDWDSLWTGYSFMMHTSAGAEGAGQALASPGSCLEEFRSA
PFIECHGRGTCNYYANSYSFWLATVEASDMFSKPQPETLKAGDLRTRISRCQVCMKRT
NT seq 5037 nt   +upstreamnt  +downstreamnt
atgagggcggccgccgggaccgccgccggcttgctctgcttcctgggcctgagccagtgg
ggttggcccgtcgatgcggccgcttgtcacgggtgttcatctggacccaaatgtgactgc
agtagcgtaaaaggagagaagggagaaagaggacttccaggtttggagggccacccaggt
ttacctggatttccaggagcagaaggaccacctgggcctccaggtcaaaagggtgatgac
ggtgctcctgggccagtgggcccgaagggaatcagggggccccctggacttcctggattc
ccagggacaccaggtcttcctggaatgccaggccatgatggagccccaggacctcagggc
atcccagggtgcaatgggacaaaaggagaaagtggatttctcggcttttctggtattccg
ggtttaccaggtcccccgggtcgtcctgggattccaggagtgaagggacagccggggagt
ataattctatccacggtgctgggcccaaagggggacccaggcgatccggggcttccagga
agacaaggtccagctggtatgaccggaagcccagggcctctcggttcccctggtctgcca
ggatggttggggcctcctgggccaccaggaattcaaggaccaaaggggaatatgggcttg
aatttccagggtcccaaaggtgaaaagggcgaacaagggctacaaggtccgcctggcccc
ccggggcagattggggaaatgaagagaccaaatgagacggagctgctgaaaggagatcag
ggtgctccgggggaccgaggctcacctggacttcctgggctccgcgggcctcctggtctt
cctggcggtgtgaaaggtgaaaaaggctggccgggagaaccgggccagaaaggtaagcca
ggcagagatggagccagtggcctcccgggcatgcaaggcttgcctggtgatcccggtgtt
cctggtaaacccggaaggggaggcgaaaagggtcaaaaaggtgacaccggccccactggc
ccgcctggacttgtacttcctcgtggtgggactggtgaaaaagggaacttgggcttgcct
ggcttgccgggagagaaaggagatcaaggctcccctggggcaccgggtctacccggcctt
cctgggcctccagggcctactgtcacgggacctcccggaccccctggctttcctggggaa
aggggcgagaagggagctaaagggctgcccggcgtccccgtacctggccaacctggacgt
gatgggcagcccggggctcccggtctccctgggactccgggcaaaccgggacctcatttc
ccttctaatggtgcggtgtgtgaaaagggagctcggggcccaccaggatctccgggggac
agaggagtgccaggagagcaaggagtgaaaggagacaagggggacacctgcctcaattgt
atcgaagctggcctccctggccttccagggcagcctgggctgccaggacctccgggtctc
acaggagctcgtggtttccctgggcagaaaggtgccaaaggaaatgccggtgccaccggt
ccagtaggatcgccaggccttccaggagttccgggtgcctcaggagagccaggttcgaaa
ggaagtccaggggacaccatcagtttcccagaaatgaagggtgacaaaggcgacgcaggt
ctccctggagcttcagggattcctggtttgcctggccgtccaggaaaagatggattgccc
ggacttcccggcatcaaaggaaaacctggtggctttgctttgaaaggtgaaaggggtccc
cccggaaagccaggtttgccgggtctccctgggaccagagggcccatgggtcctcccggt
ttgggcccaccaggccctgtgggtaaaaaaggcatcccaggcatggcaggaaatccgggt
cccccaggaatcccaggtgccaaaggtgatcccgggccaactatatcccaaccgggacct
cgtggcttgcctggcctgcctggcagagatggtgatgtgggtcttccaggtgatccaggg
tttccaggtgtgccaggcttgccgggaatccctggcagtaaaggggaaccaggtcgcccc
ggcattggtcttcccggaccaccaggtcccaaaggttaccaaggaatgccggggcctccg
ggaacccctggagcacctggaagacgtggcctacaaggccctcctgggcatcctggtctc
ccaggtccaaagggggagccaggggttggccttcctggaccacctggactcaagggactc
ccgggcgttaaaggaacacctggtccaaaaggaagcactggtttcccggggctctcgggc
aacccagggctccctggcttggatggaccggccgggccaaaaggtgacccaggaacagtc
ggacagcccggattcacgggtccttctgggctaccaggaatgggccgtccaggccgtcca
ggaccgccaggggttcctggacctcttggtcaaccaggcttgccaggagacccgggagga
aagggagacccaggaccccctggatttgatgtctcggggcctcctggtgagagaggccat
ccgggcctccctggaacacctggggtcacggggcttcaaggttttccagggtccccaggt
cgagatggtgcccccgggctttcaggtgccaaaggtgaaatggggaagctggggcctcca
ggaccaccgggacctttaggaattcctggcaggagtggtgttcctggcttgaaaggtgag
aatggtttgccgggtcagccaggatttcctggtcccgtaggacaaaaaggtgaaagaggc
gagactggcattccgggccctcctggacaattggatcccaactatccgaaagtaaagggg
gagaagggagagccaggattaccaggcgttcctggaccgttcggtcccaaaggcttccac
ggtcatcctggagacccaggacaacctgggctggacggacagcctggttccccaggacca
ccaggccccaggggaaaccaaggccttcctgggcgaccgggacccgtaggccctcctgga
ttaaaaggctgcataggagaaatgggatttccaggtcttcaaggtgtgcaagggtcccca
ggggtgcctggagttgccggccagcctggctccccgggatttcctggacaaaacggagag
aaaggagcccctggttttggaggaataggccgcccaggtctcccgggtcctaagggtgat
cctggcctgcctgggtacccaggtactcctggcagtcaaggtgccccgggagacactggt
tcgcccggtgccccagggagccctggggtcaaaggacagccaggcttgcccggacggcca
ggtattataggccttcctggacccagaggtatggatggcccatctggcagccctggtatt
ccaggacaatctggtcctataggcagtcagggccatcctggtcccccaggatctccagga
gagaaagggaaaccgggtcaagatgggattcctgggccagctggacagaagggtgaacca
ggtcaaccaggatttggattcccaggacctcccggaatctcaggatttcctggtgagaaa
ggtgatgaaggttcgccaggtactccaggaagccctggccctcaaggccccaagggtgaa
cggggctttccaggctttcctggtatacaaggacccccaggtcctcctggctcaccaggt
caaaatcgagaaggtcccaaagggaaccctgggccccgaggtcatcctgggagaacaggg
cctaaaggtccccggggtgtccctggaaatggccgagtgaaaggaaagagaggagatccg
ggcctacctgggaagcccggtttgcctggtctcaaaggagaacgaggtccacctgggccc
cagggtgatcctgggtggccagggttcattggaatgaaggggaatcctggtatccaaggt
atcccgggatcccaagggatgaagggtccctccggtgctcctggttcagccggccctgca
ggggctccgggccctagaggcccttcaggttcccctggctttcctggtccctctgagaag
gatatcatcatcaaaggagatattggacctccaggactgccaggcttgccaggattgaaa
ggtcctgtggggatcccaggacccccaggcttaccaggcccgactggcccagtgggagac
cctggacgtaatggacgccttggccttaatggcccggtaggccccaaaggagacccaggc
ccgtcaggccaaccaggtaaccgtggagtagaaggttctccaggatcagagggcctgcca
ggtttgccaggtccccctggaaccctctctcttgcccatggctttctcatcacacggcac
agccagaccacacatattccacaatgccctcaaggaaccgtccagatctacacggggttc
tctctcctttatgtacaaggaaacgagagagcccatggccaagacttggggacatctggc
agctgtctccaccgcttcagcaccatgcctttcatgttctgtaacatcaacaatgtatgt
aactttgcctcaagaagtgactactcctactggctatccactcccaaaccagtgccgatg
accatggagccactgtcgggacaaagcatcgtgccgtttatcagccggtgctcagtatgt
gaagccccggcaatggtgattgcggttcacagccagaccacccagctcccctattgcccg
caagactgggattctctctggactggttattcctttatgatgcacacgagtgctggggca
gagggcgcaggtcaggccctggcctctcctggttcctgtctggaagaattccgttcggcc
cccttcatcgaatgccacgggcgggggacttgcaactactacgccaactcctacagcttc
tggctggcgaccgtggaggcatccgacatgttcagtaagccccaaccagagacactcaaa
gcaggagacttgaggacacgcattagtcgatgtcaggtttgtatgaaaaggacataa

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