Antechinus flavipes (yellow-footed antechinus): 127543365
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Entry
127543365 CDS
T08818
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04010
MAPK signaling pathway
afz04020
Calcium signaling pathway
afz04713
Circadian entrainment
afz04925
Aldosterone synthesis and secretion
afz04927
Cortisol synthesis and secretion
afz04929
GnRH secretion
afz04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127543365
04020 Calcium signaling pathway
127543365
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
127543365
04925 Aldosterone synthesis and secretion
127543365
04927 Cortisol synthesis and secretion
127543365
09159 Environmental adaptation
04713 Circadian entrainment
127543365
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
127543365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afz04040
]
127543365
Ion channels [BR:
afz04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127543365
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
127543365
NCBI-ProteinID:
XP_051825352
LinkDB
All DBs
Position
1:340629810..340775858
Genome browser
AA seq
2354 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVECQSERCNILEAFDDFIFAFFAVEMVIKMVALGIFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDNNFARNNNLTFLNPYYQTEEGEE
NPFICSSHRDNGMQKCSHIPIRRELRVECTLGLEAYGRSLESLDGGGRNSCINWNQYYNV
CRTGDLNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVG
SFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYIGH
IFRKVKRRTLRLYATWQKKRREKVNPNGALHGQGVGRRGRKRVPSIHHLIHHHHHHHHHH
YHISNGSPRGPCGSPEVRGDVEPRGGKPGTRLMLPPPPSPGPQGLPSPPHDAESVHSIYH
ADCHVEAPQDQGGRVSRAAARLKLATGLGSMNYPTILPSASGGKGSLALGPVGKKGSGPP
VPVVNNSSVSLSADAYGKLQHLVGEHGLCRAPSRLSGLNVPCSLPSPQAAMLTCELQNCP
YCANILEDPEFELSELESYDSDTNGVYEFTQDLRHGDHRDPIQQPQQAPPQSGSRRRGGV
PRKKVGDRSGVACLWAAFGNKLKRIVESKYFNRGIMIAILINTLSMGIEHHEQPEELTNA
LEISNIVFTSMFALEMLLKLLAFGLLGYIRNPYNIFDGIIVVISVWEIIGQSDGGLSVLR
TFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLK
TDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNY
VLFNLLVAILVEGFQAEGDANRSDTDEDKTSANFEEDFEKLRDLRATEMKMYSLAMTPNG
HLEGRGSLPPPLIMRTAATPMLTPKSSPNVDSTPNLLDSRRGSSVSVDPQHYDQKSMSSL
RSSPCANWGPNSTWGSRRSSWNSLGRAPSLKKKSQCGERESLLSGEGKGSTDDESDDAKP
GSAGRASQLRRAESLDYRSTLDLREGLQRLSPRPTTLLPLEYQDCNGQMVHMPSEFFLRI
DNHKEDPSDYDDDMDDSYCFRLKKMLEPYKPEWCKTHEDWSFYLFSPQNRARVTCQKVIA
HKMFDHVVLVFIFLNCITIALERPDIDPNSTERVFLSVSNYIFTAIFVAEMMVKMVALGF
FSGENSYLQSSWNVLDGLLVFVSIIDIIVSMASAGGAKILGILRVLRLLRTLRPLRVISR
APGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCDGPDTRNITTKAD
CCAAHYRWIRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGINQQPIQNHNPWML
LYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSTFLST
EAQRRPYYADYSPTRRSIHSLCTSHYLDLFITFIIGINVITMSMEHYNQPKSLDEALKYC
NYVFTIVFVFEAMLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPT
IIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFG
KLDCSEDNPCEGLSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECAREDKHCLSYL
PIISPVYFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAEMDAEIELEMAQSSTAPA
ALARGPGPPPAPDSRPSRENRRTGSPESTLSMKQQVLEGAGSSRESQNFLMVHKVAVSRM
HSLPNDSYMFRPVVPATAPNTLQEVEMETYPAKAPTGSVTSVHSQPVESCSSLQVPVENT
SVSAASGLSLSANAEVPRSSQSTPRSPSLSRLLCRQEALRTDSLEGQIADSRDNLTGEPS
ENTQPKRGPAGTLGASLMCLSPLSLPGTPPRSPTSSPHSRSASVRTRKHTYGQRSIAKRP
TGQSGDPPTDPETSDPADEEVSHINSSVRAWRPQAEARSHSASTFSSPARKPSASPSEGH
MGGGGLDRDLKKFYSVDAQGFLDKPDWADDQRRHSVEVCSSVSDGESIYEESGEKKARAS
CPAETEPAPGVRRKKKMSPPCISIDPPAEDEGTPAPRPPVSESSATTLRRRTPSCEVTPT
PAASHRDSLEQGESGASGADMPPKGEWRVPAQCRAELLMVPNFSFELPDASSPSGSHFLD
SGQSVAANSRPDAGESPVGATTPMELQKTEHFKSSGDPPEKGQELLLTVPKSPLKKSGPP
PTTPTTDDQIDEPV
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcatccttctgaactgcgtgactttgggcatgttccagccctgtgaggatgtg
gaatgccaatcagagcgctgcaatatcctggaggcatttgatgacttcatctttgccttc
tttgctgtggaaatggtcatcaagatggttgccttggggatcttcggccagaagtgttac
ctgggagacacatggaatcgtctagacttcttcatcgtcatggctggcatgatggagtat
tctctggacggacacaacgtcagcctttctgccatccggactgttcgcgttctccggcca
ctcagagccattaacagggtgccaagcatgcggatcctggtgacattgctgctggacacg
ctgcccatgctgggcaacgtcctgctcctctgtttctttgttttcttcatctttggcatc
gtgggggtgcagctctgggctggactcctaaggaacagatgcttcctggacaacaacttt
gccaggaataacaacctgacctttctgaacccctattaccagacagaagaaggtgaggag
aacccattcatttgttcttcacaccgtgacaacggcatgcagaagtgttcccacatcccc
atccgccgggagctacgagtagagtgtacactaggcctagaggcttatggccgctccttg
gagagtcttgatggtggtggaagaaactcctgcatcaactggaatcagtactacaacgtg
tgcaggacaggcgacctcaacccgcacaacggagccatcaactttgacaacattggctat
gcctggatcgctatcttccaggttataaccttggaaggctgggttgacatcatgtattat
gtcatggatgcacattctttttataattttatatattttatattactaataatcgtgggc
tctttcttcatgataaacctgtgcctggtggtgatcgccacacaattctcagaaacaaag
cagcgggagaaccagttgatgcaggagcaacgggctcgctacctctccaatgacagcacc
attgccagcttctccgaaccaggcagctgctatgaggagctcctcaaatacattggtcac
atcttccgaaaagtgaagcgccggaccctgaggctgtatgccacttggcagaagaagcgc
cgggagaaggtcaaccccaacggtgccctccacggacagggggtcgggcgccgtggccgc
aaacgggtcccctccatccaccacctgattcaccaccatcaccaccaccaccatcatcac
taccacatcagcaacgggagccctaggggcccctgcggtagccccgaggtccgcggggat
gtggagcccagaggggggaagcctggcacccggctcatgctgccgcctcccccgtcccca
ggcccacagggactcccatccccacctcatgatgctgagtcagttcacagcatctaccat
gccgattgccacgtggaagccccacaagatcagggtggccgagtgtcccgggctgctgca
aggctcaaactggccactggacttggtagcatgaactaccccaccatcctgccttcagct
tcagggggcaagggtagtttggctctgggtcctgtggggaagaagggcagtgggccgcct
gtcccggtagtgaacaacagctctgtgagtttgagtgctgacgcctatgggaagctgcaa
cacttggttggggaacatggtctctgcagggctcccagcaggctatcaggcctgaacgtg
ccctgctccctacccagtccccaagcagctatgctgacatgcgaactgcagaattgtccc
tactgtgccaacatcttggaggatcctgagtttgaactgagtgagctggagagctatgac
tccgacaccaatggtgtttatgagttcacacaagacctgcggcatggagaccaccgagac
cccatccagcagccccagcaggccccaccgcagagtgggtccaggcggcggggaggggtc
cccaggaagaaggtgggggaccgcagtggggtggcctgtctctgggcagcctttgggaac
aaactcaagcggattgtggaaagcaagtactttaaccgagggatcatgatcgccatcctg
atcaacaccctcagcatgggcatagaacaccatgagcagcctgaagagctgaccaatgcc
ttggaaatcagcaacatcgtcttcaccagcatgtttgccctggagatgctgctgaagctg
ttggcctttgggcttctgggctacatcaggaatccttacaatatctttgatggtatcatc
gttgttatcagtgtctgggaaattatcggacagtcagatgggggcctgtcagtactccgg
acctttaggctccttcgggtgctgaagctggttcggtttatgccagcccttcgacgacag
ctagtggtgctgatgaaaaccatggacaatgtggccaccttctgtatgctcctgatgctg
ttcatctttatctttagcatccttggcatgcacctcttcgggtgtaaattcagcttgaaa
actgacactggagataccgtccccgacaggaagaactttgactccttgctctgggccatt
gtcactgtgttccagattctcactcaagaagactggaatgttgtgctttataatggcatg
gcctccacttcctcttgggctgctctctactttgtggcgctgatgacctttggcaactat
gtgctgttcaacttactggtggccatcctagtggagggcttccaggcagagggggatgca
aatagatctgacacagatgaggacaagacatcagccaactttgaagaggattttgaaaaa
ctgagagacttacgtgccacagagatgaagatgtattccctggcaatgacacccaatggg
catctggagggccgtggcagtctgcctccacctctcatcatgcgtactgcagctacaccc
atgctgacgcccaagagttctcccaatgtggactccacccccaacctcttggactcacgc
agaggcagcagtgtctctgtagacccccagcactatgatcagaagtcaatgtccagccta
cgcagttctccctgtgccaactggggccccaatagtacatggggcagcaggcgctccagc
tggaacagcctgggccgggcgcccagcttaaagaagaagagccaatgtggggagcgagag
tccttactctccggggagggcaaaggcagcacagatgacgagtcagatgatgctaaacca
ggctcagcaggccgagcatcccaactgcgccgagccgagtccctggactaccgaagtacg
ctggacctgcgagaggggctccagcggctgtccccacgcccaactactctgctgcccctt
gagtaccaggactgcaatggccagatggtgcacatgcccagtgagttcttcctacgcatc
gacaaccacaaggaggacccttcagattatgatgatgacatggatgatagctactgcttc
cgattgaaaaagatgttagagccatacaagccagaatggtgtaagacccatgaagactgg
tctttctacctgttctcacctcagaaccgggctcgggtcacatgtcagaaggtcattgcc
cacaagatgtttgatcatgtggtcctggtgttcatctttctcaattgcatcacaatagcc
ctggagagacctgacattgatcctaatagcacagagcgggtcttcctgagtgtttccaat
tacatcttcacagcgatatttgtggctgaaatgatggtgaagatggtggctctgggcttt
ttctctggggaaaacagttacctgcaaagcagctggaatgtgctggatggactactagtc
tttgtctccatcatcgacatcattgtctccatggcttcagctggtggggccaagatccta
ggcatcctccgggtcctgcgattgctgaggacactgagaccacttcgggtgatcagccga
gccccaggccttaagttggtggtggagaccttgatatcgtccctcagacccattggaaat
attgtcctcatctgttgtgccttctttataatctttggtattcttggggttcagctcttt
aagggtaagttttattactgcgatggtccagacactcgaaacatcaccaccaaagctgac
tgctgtgcagcccattaccgctggatccggcgcaaatataacttcgataacctgggtcag
gctcttatgtccctttttgtgctctcgtccaaggatggctgggtgaacatcatgtatgat
ggcctggatgccgtgggcatcaaccaacagcccatccagaaccacaatccctggatgttg
ctgtacttcatctccttcctgctcatcgtcagcttctttgtcctgaacatgtttgtgggc
gtggtggtggagaacttccacaagtgccggcagcaccaggaggcagaggaggcgcggcgg
cgggaagagaagaggctccgcaggctggagaagaagcgtaggagtactttcctctccaca
gaagcccagcgcaggccgtactatgctgactattcacccacccggagatcaatccacagt
ctgtgcactagccattacttggacctgttcattaccttcatcatcgggatcaatgtgatc
accatgtctatggaacattataaccagcccaagtccctggatgaagccctgaagtactgc
aactatgtcttcaccatcgtcttcgtctttgaggctatgttgaaactagtggcctttggg
ttccgtcgattcttcaaggacaggtggaatcaactcgacttggccatagtgcttctgtcc
atcatgggcatcaccctggaggaaatcgagatgaatgcagccttacccattaaccctacc
atcatccgaatcatgcgtgtgctccgcattgctcgagtactgaagcttctgaaaatggcc
actgggatgcgggccctactggacactgtggttcaggcattaccccaggtagggaacctt
ggcctgcttttcatgctcctgttttttatctatgctgccctgggagtggagttgtttgga
aagctggattgcagtgaagataacccatgtgagggcctgagcagacacgctaccttcacc
aacttcggcatggccttcctcaccctcttcagggtgtccacgggggacaactggaacgga
atcatgaaggacacgctacgggagtgtgcccgagaggacaagcactgcctgagctacctg
cccatcatctctcctgtctacttcgtcaccttcgtcctggttgcccagtttgtgctggtc
aatgtggtggtggccgtactgatgaaacacctggaggaaagtaacaaggaggcccgggaa
gatgctgagatggacgctgagattgagctggagatggcacagagcagtacggctcctgct
gctctggcccgaggcccagggccgccccctgctccagacagccggccatccagagagaat
cgccggactgggagccctgagtccactctgtctatgaagcagcaagtcctggaaggagct
gggtcttccagggagtcccaaaacttccttatggtgcacaaggttgctgtgtccaggatg
cactccctacccaatgacagctatatgttccggcctgtggtaccagccacagccccaaac
accctgcaagaagtggagatggagacatatccagcaaaagccccaacaggttcagtcact
tctgttcactctcagcctgtggaatcctgctcatccctgcaagtcccagtggaaaataca
tctgtgtcagctgcatctggactttccctttctgccaatgctgaggttccaaggtcctca
caaagtactccaaggtcacccagcctgagtagactgctctgtagacaggaagccttgcgg
actgattcccttgaaggccagattgcagattccagggacaaccttacaggggagcccagt
gagaacactcagccaaagcggggcccagcaggcaccctgggtgcctccctgatgtgcctc
agccccctctccctgcccgggacccctcctcgctctccgacctcctccccccactcccgc
tccgccagcgtccgtacccgtaagcacacctatggccaacgaagtattgccaagcgaccc
actggacagagtggagacccccccacagaccctgagacctcagacccagctgatgaggag
gtgagtcacatcaacagctcggtgcgggcttggaggccgcaggctgaagcgcggagccac
tcggcttcaacgttctcctccccggcccgcaaaccctcggcttcccccagtgagggccac
atgggaggcggcgggctggacagagacctgaagaagttctacagcgtggacgctcagggc
ttcttggacaaacccgactgggctgatgaccagcggcgacactccgtggaggtctgctca
tccgtcagtgatggggagagcatctatgaggagtctggggagaaaaaggccagggcatct
tgcccagcagagactgagcctgctccaggggtacgaaggaagaagaagatgagtccccct
tgtatttccattgatcctcccgcagaggatgagggcaccccggctccccgtcccccggtg
tctgagagcagtgcgaccactctgaggaggaggacaccatcctgtgaggtgaccccgact
cccgcagcctcccacagagactccctggagcagggagagagtggggcaagtggggctgac
atgccccccaaaggggagtggcgggtccctgcccagtgccgggcggagctcctaatggtt
cccaacttctcctttgagctgccggatgcaagctctccaagtggcagtcactttttggac
agtggccagtccgtggctgccaactcccgaccagatgcgggagagtcccccgtgggggca
acaactcccatggaactccaaaaaacagagcatttcaaatcttccggagaccctcctgag
aaaggccaggaactcctcctcactgttcccaaaagccccctgaaaaagtcaggaccaccc
cccacaacacccactacagatgaccaaatagatgaaccagtatag
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integrated database retrieval system
