Antechinus flavipes (yellow-footed antechinus): 127543597
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Entry
127543597 CDS
T08818
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127543597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afz03021
]
127543597
03036 Chromosome and associated proteins [BR:
afz03036
]
127543597
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127543597
Coactivators
SAGA/TFTC/STAGA complex
127543597
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127543597
STAGA complex
127543597
TFTC complex
127543597
SAGA complex
127543597
SLIK complex
127543597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_HPS5
WD_LRWD1
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_DCAF12
RAB3GAP2_N
VPS8_N
DUF4144
Motif
Other DBs
NCBI-GeneID:
127543597
NCBI-ProteinID:
XP_051825779
LinkDB
All DBs
Position
1:complement(686395112..686397478)
Genome browser
AA seq
724 aa
AA seq
DB search
MEALAERQTEVVIKPDSEGPPALPASQPGDCPGESSHNSSHNGDEGGSVAASSAGGDGGT
PKPAVPPPAAAAAAATAAPEGAAGAPAATAEGIASQDRQTLLAVLQFLQRSNLRESEEIL
LREARLLEEAAGAGAQREVDGPGAEATSALLSQVAAAPTAVAPAQVGVVAAEDQPDVSAV
LSAYSQQEDPAMYEEHYSGLKHFIECSLDCYRTELSQLFYPLFVHMYLELVYNQHENEAK
SFFQKFHGDQEYYYQDDLRVLSSLTKKEHMKGNETIMDFRTSKFVLRISRDSYQLLKRHL
QKTQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGGLAGEAKREANKAQVFFGLLKEPE
IEVPLDDEDEKGENEEGKPPQKKPKKDSMGSKRKRQDPNAPPQNRIPLPELKDSEKLDQI
MNMKETMKRVRLGPDCLPSICFFTFFNAYQGLTAVDITDDSSLIAGGFDDSTVRVWSVSP
KKLRSMKTAKDLSLIDKESDNVLERIMDEKTASEMKILYGHSGPVYGASFSPDRLWATNH
HEPLRIFAGHFADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLA
FSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTSTVCSLKFSRDGEILASGSMDNTVR
LWDAIKAFEYLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLVLAAGA
YSPQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgctggcagagaggcagacagaggtggtgatcaagcctgattcggagggaccc
cctgcgctccctgcctcgcagccgggcgactgtccaggggagagcagccacaacagcagc
cataacggagacgaaggcggcagtgtcgcggcgtcgtcagccggcggtgatggcgggacc
ccgaaacccgccgtgcctcctccggcagctgctgctgcggcggctacagcagccccggag
ggcgcggccggggctccggcagcgactgccgagggcatcgcttctcaggaccggcagacc
ctgctggccgtgctgcagttcctgcagcggagcaacctacgcgagtctgaggagatcctg
ctgcgcgaggccagactgctggaggaggcggcgggagctggcgctcagcgggaggtggac
ggacccggggccgaggccactagcgcactgctgagccaggtcgccgccgctcccaccgcg
gtcgctcctgcccaagttggagtagttgctgcagaggaccagcctgatgtcagtgcggtg
ttgtctgcctacagtcaacaagaggatccagcaatgtatgaagagcactacagtggactg
aaacatttcattgaatgttccttggactgttatcgaacagagttatctcagttattttat
cctctatttgtacatatgtacttggaattggtctacaatcagcatgaaaatgaagcaaaa
tcattctttcagaagtttcatggcgatcaggaatattattatcaggatgaccttcgagtg
ttatcgagccttaccaaaaaggagcacatgaaagggaacgagaccattatggattttcga
acaagtaaatttgttttgcgcatttcccgggattcttatcaactcttgaaaagacacctc
cagaagacacagaataaccaaatatggaacatagtccaggagcacctgtacattgacatc
ttcgatgggatgcctcggagtaagcaacagatagatgctatggtgggaggtttggccgga
gaggcaaagcgagaggcaaataaggcacaggtcttttttggcttattaaaagaaccagaa
attgaagttcctttggatgatgaagatgaaaaaggggagaatgaggaaggaaaacccccc
caaaaaaaacctaaaaaagatagtatgggatctaaaaggaaaaggcaagatcctaatgct
ccacctcaaaacagaattcctcttcctgaattgaaagattcagagaagttggatcagata
atgaatatgaaagaaaccatgaaacgtgtgcgtcttggtccagattgtttgccttccatc
tgtttctttacattctttaatgcatatcagggtctcactgcagttgatatcactgatgat
tccagtctgattgcaggaggttttgatgactccactgttagagtatggtctgtgagtccc
aaaaaacttcgtagtatgaagacagcaaaggatctcagccttatagataaagaatcagat
aatgttttagaaagaatcatggatgaaaaaacagcaagtgaaatgaagattttatatggt
cacagtggacctgtttatggggcaagcttcagtcctgataggctttgggctacaaatcat
catgagcctttacgaatatttgctggccactttgcagatgtgaattgtacacgattccat
ccaaactctaactatgttgctacaggttcagcagacagaacagtaaggttatgggatgtc
ttgaatgggaactgtgtaagaatcttcactggacacaagggaccaattcattctttggca
ttttctcccaatgggagattcctggctactggagcaacagacggcagggtacttctttgg
gatattggacatggattgatggttggagaattaaaaggtcatacaagcacagtatgttca
ctcaagtttagtagagatggagaaattttagcatcagggtcaatggataacacagttcgt
ttatgggacgctataaaagcatttgagtacctagagaccgatgattttactacagccacc
ggacacataaacttgcctgaaaattcacaagatttattactaggaacttacatgaccaag
tcaacaccagttgtacatctccattttactcgaagaaacttggttttagctgcaggagct
tatagtccacaataa
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integrated database retrieval system
