Antechinus flavipes (yellow-footed antechinus): 127543874
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Entry
127543874 CDS
T08818
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04140
Autophagy - animal
afz04211
Longevity regulating pathway
afz05010
Alzheimer disease
afz05014
Amyotrophic lateral sclerosis
afz05016
Huntington disease
afz05017
Spinocerebellar ataxia
afz05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127543874
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
127543874
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
127543874
05014 Amyotrophic lateral sclerosis
127543874
05016 Huntington disease
127543874
05017 Spinocerebellar ataxia
127543874
05022 Pathways of neurodegeneration - multiple diseases
127543874
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afz01009
]
127543874
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127543874
03029 Mitochondrial biogenesis [BR:
afz03029
]
127543874
Protein phosphatases and associated proteins [BR:
afz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127543874
Membrane trafficking [BR:
afz04131
]
Autophagy
Autophagosome formation proteins
ULK complex
127543874
Mitochondrial biogenesis [BR:
afz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127543874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
127543874
NCBI-ProteinID:
XP_051826162
LinkDB
All DBs
Position
1:472034226..472102909
Genome browser
AA seq
1595 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIQSKYKIAIHQQVLVVNGGECMASDRRVC
TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSAENDMELKVEESLMMPAVFHTVASRTQ
LAVEMHEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTLSYQKLLSKFESAYSNYLQ
SVEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSSPEHEEKETENNETEKSS
ELVLYPDMPRMTNKSLLASYCKSVEHSAPDNTDPESGKEIKESCQSTIQEEEISVEHKES
DLPSFNVSLLDWINVQDRPNDVESLVRKCFDSMNRLDPRFIQPFLVECRQTVAKLDNQNM
KAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQ
LMIMLNNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADKEGEKLQALLRLVTEL
LERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALINDGKHLYEAEKSKRESFG
KLFRKSFLRNRLFRGLDSWPPSFCTRKPRKFDGELPDISLTDLKFLQSFCPSEVQPLLRV
PLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASMSQTSPQSVTTPRMEST
TGITTTTSPRTPPPLTIQDPPCPPVCPLEELSPDSIDAHTFDFETIPHPNTEQTLHQESL
DLDSLAESPESDFMSAVNEFVIEENLTSPNPISDPQSPEMMVESLYSSVINAIDSRRMQD
TNICGKEDAGDHSSLNIQMEKCRAVAQESQFSLQNIKEDLCHFRTLVQKEQCDFSNSLKC
TAVEIRNIIEKVKCSLEITLKEKHQKELQSLKNEYEAKLNALISDSEENEKKIKKLKGDL
VGLEEVLQNKDNEFALVKNEKEAVLCLQNEKDQKLLEMEHAMKNQNFEIKELKQSREIVL
EDLKKLHVENEERLHLLRAELQSLEQSHLKELEDTLQDKHTQEFEKVLNDHKVSLEKLKK
ENQQRLDQIQESHAIVVQEKEQQLQDLKVKVSDLSDLRCKLEVELALKEAETDEMKILLE
ENKAQQQETLKILIEKETENLKSEISKLNQKILDNNEDYQIGLAELKTLMTVEKDQCISE
LVGRHEEESNLLRTELNKVTSLHQQAFEIETKLKEQIVELQSKLELQLSILEKQNNERMT
QQQEKYEAIIHKLEEDKEKIIMSQEQDKEQLIQKLNCEKEDAVQVALKEFELQRDAVEKE
LLEKIKHLESQITKSPPIEHTSEDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQN
VRTSLIAEQQTNFNTVLTREKMKKENIINDLSDKLKNTMQQQERDKDLIESLSEDRARLL
EEKKKLEEEVNKLRSSSFVPPPYLATAPELCGACAPELPSETDRLASEMADEGRTDSAME
TSMMSVHENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIR
DFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLTALDLKPGECASGTSRRPWVLGKV
MEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttttggtcaacactggaactaccctaacatttgatactgaactt
gcagtgcaaactgtggcagaccttaaacatgcaattcaaagcaaatataagattgcaatt
caccagcaggtactggtagtaaatggaggagaatgtatggcctcagatcgaagagtatgt
acttacagtgctgggacagatacaaatccaatttttctgtttaataaagaaatgatctta
tgtgatcgtcctcctgctattcccaaaacaacattttcagcagaaaatgacatggaatta
aaagttgaagagtctcttatgatgcctgcagttttccatacggtagcttcaagaacacag
cttgctgtggaaatgcatgaggttgccaagaaactttgttccttttgtgaaggtctagtc
catgatgaacacctgcaacatcaaggctgggctgcaataatggccaatttagaggattgt
acattatcctaccaaaaactgctttccaagtttgaaagtgcttattcaaattacctacag
tctgtagaagatatcaagttgaagcttacacatttaggaactgcggtttcagtaatggcc
aagattccacttttggagtgcctaacaagacatagctacagggaatgtttgggaagactt
gattcttctcctgaacatgaagaaaaagaaacggagaacaatgaaactgaaaaatcatca
gaattggtgctttatcctgatatgcctcggatgactaacaaatcattgttagcctcatat
tgcaagtcagtggaacattcagccccagacaacacagatcctgaaagtggcaaagaaatt
aaggaatcttgtcagagcactatccaggaggaagaaatttcagtagaacataaagagagt
gatttgccttctttcaatgtttccttattagactggataaacgttcaagatagacctaat
gatgtggaatctttggttaggaagtgctttgattctatgaacaggcttgatccaagattc
attcagccctttttggtagagtgtcgacaaactgttgccaaactggataatcagaacatg
aaagccattaaaggacttgaagacaggctttatgcactggaccagatgatagctagctgc
agccgattggtaaatgaacaaaaagaacttgctcagggatttttagctaatcagaagaga
gctgaaaacttgaaagatacttctgtgctacctgatttgtgcctgagtcatgcaaatcag
ttgatgattatgttgaataatcatagaaaactgttggatattaaacagaaatgtaccact
gccaaacaagaacttgcaaataatctacaagtcagattgaagtggtgttgctttgttatg
cttcatgctgacaaagaaggagagaagctacaagctttgcttcgccttgtaacagagctg
ctagaacgagtcaagattgtagaagctcttagtacagtaccacagatgtactgcttagct
gttgttgaagttgtaagaagaaaaatgttcataaaacactacagggagtgggctggtgct
ttaatcaatgatggaaaacatttatatgaagctgaaaagtcaaaaagggaatcttttgga
aaattgtttaggaaatcttttttaagaaatcgtctgtttaggggacttgactcctggcct
ccttctttttgtactcgaaagcctcgtaagtttgatggtgaacttccagacatttcttta
actgatttgaagtttctgcagtctttctgtccttcagaagtacaaccattactcagggtt
ccattactttgtgattttgaacctctacaccagcatgtactcgcgctacataatttagtg
aaagcagcacaaagtttggatgaaatgtcacagaccattacagatctactgagtgaacaa
aaggcttccatgagtcagacatccccacaatcagttactaccccaaggatggaaagtaca
acaggaattacaactactacctcacctagaactcctcctccacttactattcaggatccc
ccgtgtcctccagtatgtccattagaagaattgtctccagatagcattgatgctcataca
tttgattttgagacaattcctcacccaaatactgaacaaacccttcatcaagaatcttta
gatttagactctttagctgaaagccctgaatctgattttatgtcagcagtgaatgagttt
gtaatagaagaaaatcttacatctcctaatcccataagtgatccacaaagtccagaaatg
atggtagaatcactctattcttcagtcatcaatgcaatagacagcagacgcatgcaggat
acaaacatatgtggcaaagaagatgcaggagaccattcttctctaaatattcaaatggaa
aaatgtagagctgttgcccaagaatcacagttcagtttacaaaacataaaagaagatctc
tgtcacttcagaacacttgtgcagaaagaacaatgtgatttctctaattctttaaaatgt
acagctgtagaaatacgaaatatcattgaaaaagtaaaatgttctctggaaataacacta
aaagaaaaacatcagaaagaattgcagtctttaaaaaatgagtatgaagctaaactcaat
gcattaataagtgatagtgaagaaaatgaaaaaaagattaaaaaattaaaaggagattta
gtaggtcttgaagaagttttacaaaataaagataatgagtttgctttggttaagaatgaa
aaagaagctgttctttgcctgcagaatgaaaaagatcagaaactgttagagatggagcat
gcaatgaagaaccaaaattttgaaattaaagaactgaagcagtcacgagaaattgtgttg
gaagacttaaaaaagctccatgttgagaatgaagaaagactacatctccttagggcagaa
cttcagagtttggaacagagtcacctgaaagaactagaagatactcttcaagacaagcac
acacaggaatttgaaaaagttttgaatgaccacaaggtttctttagagaaattaaaaaag
gaaaatcaacaaaggcttgatcagatacaagaatcccatgcaatagttgtccaagaaaag
gaacaacagttgcaggatttaaaagttaaagtttctgatttgtctgacctgaggtgcaag
ttagaagttgagcttgctttgaaagaagcagaaactgatgaaatgaaaatattattagaa
gaaaacaaagcccaacagcaagaaactttaaaaatcctcattgaaaaagaaacagaaaat
ttgaaatcagagataagtaaattaaaccagaagattctagataataatgaggactaccaa
ataggtttagcagagctgaaaactttaatgactgttgaaaaagatcagtgcatttcagag
ttagtcggtagacatgaagaggaatcaaatttgctgagaactgaattaaataaggtaaca
tctttacatcagcaagcttttgaaattgaaactaaattgaaagaacaaatagtggaattg
cagagtaagttagagttgcaattgagtattcttgaaaagcaaaacaatgaaagaatgacc
caacaacaagaaaaatatgaagctatcatccacaaacttgaagaagacaaagagaaaata
attatgagtcaagaacaagacaaagaacaactcattcagaagcttaattgtgaaaaagag
gacgctgttcaagttgcccttaaagaatttgagttacagagagatgctgttgaaaaagaa
ctattggaaaaaattaaacatcttgagagtcaaataaccaaaagtcctcccattgagcat
accagtgaagattcatcaagtttagttgctgaacttcaagaaaaacttcaggaagaaaag
gccaagtttttagaacaacttgaagaacaagaaaaaagaaagaatgaagaaatgcaaaat
gttagaacatctttgattgcagaacaacagactaattttaacactgttctaacaagagaa
aaaatgaagaaagaaaatataataaatgatcttagtgacaaattgaaaaatacaatgcaa
caacaagaacgagataaagatttaattgaatccctttctgaagatcgagctcgtttgctt
gaggagaagaaaaaacttgaagaagaagtaaataaattgcgtagtagcagttttgttcct
ccaccatatttagctacagcccctgaactttgtggtgcttgtgcacctgaactccctagt
gaaacagacagattagcctcagaaatggcagatgaaggaagaacggattcagcaatggaa
acaagcatgatgtctgtacatgaaaatattcacatgttgtctgaagaaaaacaaaggata
atgttgttagaaagaactttgcagttaaaagaagaagaaaacaagcggttaaatcagaga
ttaatgtctcaaagcatgtcttcagtttcttcaaggcattctgaaaaaatagctattaga
gattttcaggttggagatttggttctcatcatcttggatgaacgtcatgacaattatgta
ttatttactgttagcccaactttatacttcctgcattcagagtctctcactgcattggac
ctcaaaccaggtgagtgtgcttcaggtacatctagaagaccgtgggtacttggaaaagta
atggaaaaggaatattgtcaagccaaaaaggcacaaaacagatttaaagttcctttgggt
accaaattttacagagttaaagctgtgccgtggaacaagaaagtataa
DBGET
integrated database retrieval system
