Antechinus flavipes (yellow-footed antechinus): 127543968
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Entry
127543968 CDS
T08818
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03013
Nucleocytoplasmic transport
afz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127543968
09122 Translation
03013 Nucleocytoplasmic transport
127543968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127543968
03041 Spliceosome [BR:
afz03041
]
127543968
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127543968
Spliceosome [BR:
afz03041
]
Complex C
Other components
EJC/TREX
127543968
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127543968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
127543968
NCBI-ProteinID:
XP_051826323
LinkDB
All DBs
Position
1:complement(497757703..497814960)
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AA seq
665 aa
AA seq
DB search
MSPSPPLFSLPEARTRFTNSTRDALINKNIKPLLSTFSQLAGSENEKKCTLDQAFRVILE
EEIITRASCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHIEDRDEGMEVEEGEMGDDEAPTSCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKESVRSICRRPSDSKPTRVV
RKRTAPEDFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQ
ADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKEL
PPPSEEIKTGEDEDEEDNDALLKENNESPDVRLDKPVTGDQIDLYANKLGEQWKILAPYL
EMKDSDIRQIESDSEDVKMRAKQLLVAWQDQEGIHATPENLINALNKSGLSDLAESLTND
TETSS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgtcgccgcctctcttcagtttgcccgaagcgcggacccggtttacgaattct
accagagacgccttgatcaacaaaaatatcaagccattattgagcaccttcagccaatta
gctggcagtgaaaatgagaaaaaatgtacccttgatcaagctttcagagttattctagaa
gaggaaattataacccgtgcatcatgtgaaaatgttttggctattatttctcttgctatt
gggggagtcactgaaggtatttgtacagcatctacaccttttgtactattgggagatgtt
ttggattgtcttcctttggatcaatgtgacacaatcttcacctttgtggagaaaaatgtt
gccacttggaaatcaaatacattctattctgctggaaaaaactatttgttgcgtatgtgc
aatgatctccttagaagattatcaaagtcccagaatactgtgttctgtggaaggattcag
cttttcttggccagactttttccattgtcagagaaatcaggtcttaacttacaaagtcag
tttaatcttgaaaatgtcactgttttcaacacaaatgaacaagagagcactttgggtcag
aagcacattgaggatagagatgaaggaatggaagtagaggaaggagaaatgggagatgat
gaagcgccaacaagttgttccattccaattgattacaacttgtatagaaaattctggtca
cttcaggattacttcagaaatcctgtgcagtgctatgagaagatttcatggaaaactttt
ctcaagtattctgaggaggttttagctgtttttaaaagttataaactggatgatactcag
gcctcaagaaagaagttagaagaattgaaaaccggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagcttatggatctacaactgagtgatagtaactttcgccgtcac
atccttctgcagtatctcattttatttcaatacctcaaggggcaagtaaaattcaaaagt
tcaaactatgttctaactgatgagcaatccctgtggattgaagatactacaaaatcagtc
tatcaactactatctgaaaacccccctgatggagagagattttcaaaaatggtagagcat
atattaaacacagaagaaaattggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagtgtgcgttctatttgccgtagaccttcagattccaagcctacaagagtcgta
aggaagagaacagcaccggaggatttcctggggaaaggacccaacaaaaaaattctgatg
ggaaatgaagaattaacaaggctttggaatctctgtcctgataatatggaagcttgtaaa
tcggagtccagggaatatatgccaactttggaagaattttttgaagaagccattgaacag
gcagacccagagaatatggttgaaaatgaatataaggctgtgaataactccaattatgga
tggagagctctgaggctgttagcacgtcgtagtccacacttcttccaacctaccaaccag
cagtttaaaagtttgccagaatatctagaaaatatggttataaaactagccaaggagttg
ccacctccttctgaagaaataaaaacaggtgaagatgaagatgaggaagataatgatgct
ttattgaaggaaaataatgagagtcctgatgttcggcttgacaaacctgtaacaggagac
caaatagatctgtatgccaacaagctgggagaacagtggaaaatattggctccatactta
gaaatgaaagactctgatataagacagattgagtctgacagtgaggatgtgaagatgaga
gctaagcagttgctagttgcatggcaggatcaagagggaatacatgcaacacctgagaat
ctcataaatgcattaaataaatctggattaagcgaccttgcagagagtctaactaatgac
actgaaacaagtagttaa
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