Antechinus flavipes (yellow-footed antechinus): 127544145
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Entry
127544145 CDS
T08818
Name
(RefSeq) ataxin-1 isoform X1
KO
K23616
ataxin 1/1L
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04330
Notch signaling pathway
afz05017
Spinocerebellar ataxia
afz05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127544145
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
127544145
05022 Pathways of neurodegeneration - multiple diseases
127544145
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
127544145
NCBI-ProteinID:
XP_051826608
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Position
1:546993804..547648451
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AA seq
806 aa
AA seq
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MKSNQERSNECLPPKKREIPATSRPSEEKPVVVPNDNHRAESLTWLPSTQSGQGNMGGRP
GPGGTSTAELGLQQGIGLHKSLSTGMDYSPPSAPRSVPATTTLPAVYPPPQSGTPVSPVQ
YTHLPHTFQFIGSSQYSGPYAGFIPSQLISPPANPATSGVASAAVATTPSQRSHLEAYST
LLANVGSLSQQPGHKVEQQQHLIRTPGLITAGSPPPTQQNQYVHISSSPQSAGRTMSPPA
IPVHLHPHQTMIPHTLTLGPSSQVVVQYTDSGGHFVPRESTKKADSSRLQQAMQAKEMLN
GEMEKSRRYGVPSSADLGLMKAGGKAASHHYETRHVVVHSGPADYSTRDASGARTSVMVL
PSSNTPTTDMEVQQVTHREASPSTLNDKSSLHLGKPSHRSYALSPQQALGPEGVKAAVAT
LSPHTVIQTTHSASDPLPVGLPAFYAGTQPPVIGYLSSQQQAISYAGNLPQHLVIPGTQP
LLIPVGGADMEPSGVAPAIVTSSPQFAAVPHTFVTTTIPKSENFSAESLATQAAYPAMVQ
AQIHLPVVQSIASSTAVPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLK
IDSSTVERIEDSPTPGIAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLF
DLPCSKLSVGDVCISLTLKNLKNGSVKKGQPMDSASILLKHSKNDSLGGSRHRYAEQENG
INQGSSQMLAENGELKFPDKIGLPAAPLLTKTEPSKPVATRKRRWSAPETRKLEKSDEEP
PLTLPKPSFIPQEVKICIEGRSNVGK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagaacggagcaacgaatgcttgcctcccaaaaaacgtgagattcct
gccactagccggccatcggaggagaagccagtggtcgtgccaaatgacaaccacagggcc
gagagcttaacatggctacccagcactcagagtggacaaggcaacatgggggggaggcct
gggcctggggggacctcgacagcagagcttggtttacagcagggaataggtttacacaaa
tcactgtccacagggatggattactctccacccagtgcccccaggtctgttccagccact
accacgctccctgcggtttatcctcccccgcagtcagggacccccgtgtcccctgtgcag
tacacacacttgccgcacactttccagttcattgggtcctcccagtatagcgggccctat
gctggcttcatcccctcccagctgatctcccctccagccaaccctgccaccagtggcgtg
gcctccgccgccgtggccaccacgccatcgcagcgctcccacctggaggcctattccact
ctgctagccaacgtgggcagcttgagccagcagccagggcacaaggttgagcagcaacag
catttgatcaggactccagggcttatcacggcaggatccccaccacctacccaacagaac
caatatgtccatatttccagctctccccagagtgctgggcgtaccatgtcccctccagcc
atcccagtccacctgcatccccatcagacgatgatcccccacacactcaccctggggcct
tcctctcaggtggtggtgcaatacacagactctggtggtcattttgttccccgggaatcc
actaagaaggcggacagcagcaggctacagcaggccatgcaggccaaggagatgctgaat
ggagagatggagaagagccggagatacggggtcccctcctcggcagacctgggcctcatg
aaggcaggtgggaaggcggcctctcaccactatgaaaccagacacgtcgtggtccactca
ggccccgccgactacagcacccgcgacgcctcgggcgcgcggacctccgtgatggtcctc
cccagcagcaacacacccaccacagacatggaagtccaacaggtcactcaccgagaggcc
tccccgtccaccctcaacgacaagagcagcctccacctggggaagcccagccaccggtct
tacgctctgtccccgcagcaggctctgggccccgagggcgtgaaggccgccgtggccact
ctgtccccacacactgtcatccagaccacccacagtgcttcagaccctctccccgttgga
cttccggccttctatgcagggactcagccacccgtcatcggctacctgagcagccaacaa
caagcaatcagttacgccggcaacctgccacaacacctggtgatccccgggacccagcct
ctgctcatccccgtgggcggcgctgacatggagccgtccggggtagcccctgcgatcgtc
acttcctctccacagtttgcagcagtgcctcatacatttgtcactaccaccattcccaag
agcgagaatttcagcgccgagtccctggccactcaggcagcctacccagccatggtgcag
gcccagatccacctccctgtggtccagtccattgcatcttccacagctgttcccccaaca
ctgcccccttatttcatgaaagggtcaatcatccagctggccaatggagagctaaagaag
gtagaggacttgaaaacagaagacttcatccagagtgctgagattagcaacgacctgaaa
atagactccagcaccgtggaaaggattgaagacagtcctaccccaggcattgcagtgatc
cagtttgcagtgggagaacatcgagcacaggtcagtgttgaagtcttggtagaatatcct
ttttttgtatttggacaaggctggtcatcatgctgccccgagagaaccagccagctcttt
gatttgccatgttccaaactctcagtcggggatgtctgcatctcgctcaccctcaaaaac
ctgaagaatggctctgttaaaaagggccagcccatggattcagccagcatcttgctgaag
cattcaaagaatgacagtctaggaggaagtagacacaggtatgctgagcaggaaaatggg
attaatcagggaagttcacagatgctagctgagaacggggaactaaagtttccagacaaa
ataggattgcctgcagcacccttgctcaccaaaacagaacccagcaagcccgtggcaacg
aggaagaggaggtggtctgcacctgaaacacggaaacttgagaaatcagatgaggagccg
cctttgactcttcccaagccttcttttattcctcaggaggttaagatttgcattgaaggt
cgatctaatgtaggcaagtaa
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