Antechinus flavipes (yellow-footed antechinus): 127544402
Help
Entry
127544402 CDS
T08818
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
127544402
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
afz00535
]
127544402
Proteoglycans [BR:
afz00535
]
Extracellular matrix (ECM) proteoglycans
Others
127544402
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Fn3_VIN3
Fn3_PBP1
VWA_3
Motif
Other DBs
NCBI-GeneID:
127544402
NCBI-ProteinID:
XP_051826984
LinkDB
All DBs
Position
1
Genome browser
AA seq
1794 aa
AA seq
DB search
MKTFQSKIWFCLLPALGIVHFPSYVEGQVAPPTRLRYSILSHDSIQISWKAPKGKFSGYK
LLVTPNSGEKTNQLTLQNSANKAIIQGLLPDQEYVVQLIAFDKDKESKPAQGQFRIKDLE
KRKEPKPKVKVVDKGNGSKPSPPAEENKFICKTPAIADIVILVDGSWSIGRFNFRLVRLF
LENLVTAFNVGENKTRIGLAQYSGDPRIEWHLNTFSTKDAVIDAVRNLPYKGGNTLTGLA
LNYIFENSFKPEAGARTGVSKIGILITDGKSQDDIIPPSRTLRDSGVELFAIGVKNADVA
ELQEIASEPDSTHVYNVAEFDLMHTVVESLTKTVCARVEEQEKEIKGSLVTDIGAPTELV
TSEVTARSFRVTWTPAPGKVEKYRVVYYPTRGGKPEEVVVDGTESTTVLKGLMSLTEYQI
AVFAIYSTTASEGLRGTETTLALPMVSDLELYDVTENSLRARWNAVPGASGYMILYAPLT
EGLAGDEKEMKIGETLTDIQLKGLLPNTEYTVTVYAMFGEEASDPVTGQEMTLFLSPPKN
LRISNVGANTARITWDPASKNVNSYLISYAKTSGTETNEVEVDRVSTYSLKGLTALTDYT
VAISSIYEEGQSEPLMGSFTTKQIPAQQYLEVDEESQDSFRVSWKPLSADVARQKLMWIP
VYGGKVEEVVLNEDQDTYIIEGLQPGTEYEVSLLAILSDESETEVLTAVGTTLDAPSTVS
TVTTVSPTGPVTSVFRTGIRNLVVDDESTSSLRVKWDISDNRVEQFRVTYLTAKGDHAEE
VIGTVMVPGKQNQLLLKPLLSDTEYKVTVTPIYSDGEGVSVSAPGKTLPLSGPQNLRVSD
EWYNRLRITWDPPSSPPKGYRIVYKPISVPGQALETFVGNDINTILIRNLASGTEYNVKV
FASYPSGFSDALTSEVKTLFLGVTDLEAERIQTNSLCLKWKLHSHATAYRVAIENLNDGK
KQETTMGGGTSSHCFYGLMPDSEHKISVYTQLQEITGPSVSIMEKTRPIPTPPPATTTPL
PTIPPAKEVCKAAKADLVFMVDGSWSIGDDNFNKIIKFLYNTVGALDKIGVDGTQVSIVQ
FTDDPRTEFKLNTYKTKDTLLDGIKNLSYKGGNTKTGKALKHVRDALFTAEGGTRRGIPK
VIVVITDGRSQDDVNKISKELQLEGISIFAIGVADADYGELLSIGSQPSARHVFFVDDFD
AFKKIEDELITFVCETASATCPLLNKDGNNLAGFKMMELFGLVEKDFSAVDGVSMGPGTF
NVFPCYQLHKDALVSQPTKYLHPEGLPSDYTISFLFRILPDTPQEPFALWEILNKDSDPL
VGVILDNGGKTITYFNYDYQGDFQTVTFEGPEIKKIFYGSFHKLHIVISKTLAKVFIDCK
QVGEKAVNASGNITANGMEVLGRMVRSRGPKENSAPFQLQMFDIVCSTSWANRDKCCELP
GLRDEENCPALPHSCSCSEISKGASGPAGPPGGPGLRGPKGQRGDQGPKGPDGPRGETGS
PGPQGPPGPQGPSGLSIQGMPGTPGEKGEKGDLGFPGPQGIPGSTGSPGRDGSQGHRGLP
GKDGPTGPPGPPGPIGIPGAPGVPGVTGSTGPQGDLGPPGLPGAKGERGERGDLQSHAMV
RAVARQVCEQLIQSHMARYTSILNQIPSHSSSIRTIPGPPGEPGRQGSPGTPGEQGPPGR
PGFPGNPGQPGTPGERGLSGVKGEKGNPGIGTQGPRGPPGPAGPAGEGRTGSPGPQGSPG
PRGPPGHLGVPGPQGPSGQPGYCDPSSCSSYGIGAPDPDQPEFTPVREDLEDLI
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttttcaaagcaagatctggttttgtttgcttccagctttggggattgtccat
tttcccagctatgttgaaggtcaagtggctccaccaacaagattaagatattccatattg
tctcatgacagtatacagatctcatggaaagctcccaaaggaaaatttagtggatacaaa
cttcttgtaactccaaattcaggtgaaaaaaccaaccaactgactcttcagaacagtgca
aataaagccatcattcaaggtcttttgccagatcaggaatatgtagtacaactaattgca
tttgataaagacaaagaaagtaaacctgctcaaggccaattcagaattaaagatttggag
aaaagaaaagagcctaaaccaaaggtcaaagttgtggacaagggaaatggaagtaagcca
tctccaccagcagaagaaaacaaatttatatgcaaaacaccagccattgctgatattgtg
atcctggtagatggttcatggagcattgggagattcaacttcagactggttcgccttttc
ttggaaaatttggtgacagcttttaatgtgggagaaaataaaactcggataggccttgca
caatacagtggtgatcctcggatagaatggcatctgaatacctttagcaccaaggatgca
gtgattgatgctgtccggaatctaccatataagggaggaaacaccttaacaggtcttgct
ttaaattacatttttgaaaatagttttaaaccagaagcaggagcaagaactggagtatcc
aaaattggcatcttaatcacagatggaaagtctcaagatgatattatccccccatcaaga
actctacgtgattctggagttgaactctttgcaattggtgtgaaaaatgcagatgtagct
gaactccaggagattgcttcagaacctgatagcactcatgtctataatgtagcagagttt
gatctgatgcacacagttgtggaaagcctgacaaagacagtttgcgccagagttgaagaa
caagaaaaggaaatcaaaggctcacttgtgactgacattggcgctcctacagaattagtc
acttctgaagtcactgccagaagctttagggttacctggactcctgccccaggaaaagtg
gaaaaatatagagttgtttattatcctacaagaggtggaaaaccagaggaggtggtagtt
gatggaactgaatcaaccacagtgctgaagggcttgatgtctttaacagagtatcagata
gcagtttttgcaatatatagtaccactgcaagcgaaggacttcggggaactgagacaaca
cttgctctgcccatggtatcggatcttgaactgtatgacgtgactgagaacagtctaaga
gccagatggaatgcagtgcctggtgcatcaggatacatgatcctctatgctcctctcact
gaaggcctggctggggatgagaaagagatgaaaattggggagaccctcacagatattcaa
ctaaaaggattgttgccaaatactgaatacacagtgactgtatatgccatgtttggagaa
gaagcgagtgatcctgttacagggcaggagatgacattgtttctaagtccaccaaaaaat
ctgagaatttctaatgttggagcaaacactgctagaataacatgggatcctgcttcaaaa
aatgtcaacagttacctcatttcatatgccaagactagtggaactgaaaccaatgaggtt
gaagttgatcgtgtttccacatactcactgaaaggcttgacagccctcacagactatact
gttgccatttcctccatctatgaagaagggcagtctgagcctctaatggggagttttact
acaaagcaaattccagcccaacagtatctggaagttgatgaagaatcacaagacagtttt
agagtgagttggaaacccttgtctgctgatgttgcccggcaaaaattgatgtggattcct
gtatatggtggaaaagttgaagaggttgtcttaaatgaagatcaagacacatatattatt
gaaggtctacaacctggcacagagtacgaagtttccttgttggctatactcagtgatgaa
agtgagacagaggtgttgactgctgttggaactacacttgatgctccttcaacagtatct
actgttaccactgtatctcctactggcccagtaacttcagttttccgaacaggaatcaga
aacctggttgtagatgatgaatctacttctagccttcgggtaaaatgggacatttcagac
aacagagtggagcagttcagggtgacctatcttactgctaaaggagaccatgctgaagaa
gtgataggaacggttatggtgccaggaaaacagaaccaacttcttctcaagcctctgctt
tcagatactgaatacaaagtcactgtgactcccatctattctgatggagaaggtgttagt
gtgtcagcccctggaaaaaccttgccactctctggtccccaaaatttacgtgtctcagat
gaatggtataacagattgcgaattacttgggatcccccatcttcaccaccaaaaggctac
aggattgtctataaacccattagtgttcccggtcaggcactggaaacttttgtggggaac
gatattaataccattctgattcgaaacctcgccagtggaacagaatacaatgtgaaagtg
tttgcctcttatccttccggcttcagtgatgcactgacaagcgaagtaaagactttgttc
ctgggagtgactgatcttgaagcagaaagaattcaaacaaatagcttgtgcctcaaatgg
aaactgcacagtcatgctactgcttaccgggttgccatagagaatctcaatgatgggaag
aagcaagaaactactatgggtggaggaacatctagccattgtttctatggacttatgcct
gattcagagcataaaatcagtgtttatacacagctccaagagataacaggacctagtgta
agcataatggaaaaaacacggccaattccaactcctccaccagcaacaaccacacctctt
ccaaccattcctccagcaaaggaagtttgtaaggctgccaaggcagacctagtgttcatg
gtagatggatcctggagcattggagatgacaatttcaataagatcattaaatttctatat
aatactgttggtgccctggacaagattggagtggatggaactcaagtgtccattgttcag
ttcactgatgaccccagaacagaatttaaactaaatacatataaaaccaaagacactctc
cttgatggaattaagaatctttcatacaaaggaggaaatacaaaaacaggaaaagcactt
aagcatgttcgagatgccttgtttactgcggaaggaggaacaagaagaggcatacccaag
gttatagtggtcattactgatgggcgttcacaggatgatgtaaataaaatttccaaggaa
ttgcagctagaaggcatcagcatttttgcgattggtgtggctgatgcagattatggagaa
ctgcttagcattggcagccagcccagcgcaagacatgtcttctttgttgatgattttgat
gcttttaagaaaattgaagatgagctgattacttttgtctgtgaaaccgcatctgcaact
tgccctctgctcaataaggatggcaacaatcttgcaggatttaaaatgatggaattgttt
ggtttggttgaaaaggatttttcagcagtggatggggtttctatgggacctggcactttc
aatgtgtttccatgttaccagctacataaagatgctctagtttcccagcctaccaaatat
ttgcatccagaaggattaccttcagactacaccatctcttttcttttccggatcttgcct
gatactcctcaagaaccatttgctctctgggagattttaaataaggactctgacccactt
gttggagtcatcttagataatggaggcaaaacaattacctacttcaattatgactaccaa
ggagactttcaaactgtaacctttgaagggcctgaaatcaagaaaatattctatgggagt
tttcacaagctgcatattgttattagcaagaccttggctaaagtgtttattgactgcaaa
caagtgggtgaaaaagccgtaaatgcatctggcaatattactgccaatggcatggaagtc
ttgggaagaatggtcagatcaagaggaccaaaggaaaactctgccccattccagctacag
atgtttgacattgtttgttctacttcatgggccaacagagacaaatgctgcgaactccca
ggactgagggatgaggaaaattgcccagctcttccacattcctgttcctgttctgaaatc
agcaaaggagcttcaggacctgctggcccacctggtggtccaggactccgaggaccaaag
ggtcagagaggtgatcagggtccaaagggaccagatggtcctcgtggtgaaacaggttcc
ccaggaccccagggtcctcctggtccacaaggtccaagtggactttccattcaaggcatg
ccgggaacaccaggtgaaaaaggagagaagggagatcttggttttccaggcccacagggt
attccagggagcactggatcaccaggacgtgatggttcacaaggccataggggcctgcct
ggtaaagatggacccactggccccccaggaccccctggaccaattggtatccctggagcc
ccgggtgttccaggtgtcacaggaagcactggaccacaaggtgacctaggacctcctggt
cttccaggagcaaagggagaaagaggggaacgaggtgatttgcagtctcacgccatggtt
cgtgcagtggctcgccaagtgtgtgaacaactcatccagagtcatatggctaggtacact
tcaatcctcaatcagattccgagtcattcctcatccatccggactattccagggcctcct
ggcgagccaggaagacaaggttctcctggtactcctggtgaacaaggaccaccaggccgg
ccaggcttcccaggcaacccaggacagccagggaccccaggagaaagaggtttatcaggt
gtcaagggagaaaaaggaaatccaggcattgggactcaaggacccagaggtcctcctgga
cctgcaggacctgcaggtgaaggtcgaactggtagccctgggccacaaggttcacctggt
cctagaggtccacctggtcacttaggtgtacctgggccacaggggccttcaggtcaacct
ggctactgtgacccttcttcctgttccagctatggtattggagcacctgaccctgatcag
ccggagttcacacctgttcgagaggatttagaagacctgatctga
DBGET
integrated database retrieval system
