Antechinus flavipes (yellow-footed antechinus): 127545161
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Entry
127545161 CDS
T08818
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
127545161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afz03000
]
127545161
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
afz03310
]
127545161
Transcription factors [BR:
afz03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127545161
Nuclear receptors [BR:
afz03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
127545161
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127545161
NCBI-ProteinID:
XP_051828217
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Position
1:complement(673017356..673052858)
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AA seq
532 aa
AA seq
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MLHWPPLLRESRLAESWSRAGPGRAELWEGRGGGRRRDSPGDRSEPESQPCAPAQLSAQQ
RVPKSPFSRRGGKRAAGSMRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNA
SYSCSRQRNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQRHQQ
SQEAGQSMDGGGLLPRDGAHVAGSLSDLDHLSGLPEGLLFDMPLSPEETEAGAAAPTYYT
LDLLGSAQPSPEPTCLETLYEMGLDPGVLAHSGTPGMPSEREIERVAQNVIRSHWETCQY
TTEELKRLAWAQYTQEELCSLQAKPCEVLWQQCSLQISHAIQFVVEFAKHICGFMDLDQN
DQIILLKAGCLEVLLIRMVRVFNPLNNTVLFDGKFGGMQMFKALACDDLIGAIFELERGL
CRLQLSDEEIALFTAAVLLSPDRPWLLEAKKVQNLQDQVFLALQHEIQKQPSPEDRLSKL
ISKLPLLKAICRLHLDKLECFRLLHPETARLFPPLYKEVFNTELQYSALRES
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgttacattggccacctctgctccgggaaagtaggttagcagagtcctggagccgagcc
gggccgggtcgggccgagctctgggagggaagaggtgggggacgccggagagacagtccc
ggagaccgaagcgagcccgagagccagccgtgcgccccggcccagctctctgcccagcag
cgcgtccctaagagtccattctccagaaggggcggtaagcgggcagccggcagcatgaga
gctcagattgaagtgatcccctgtaagatctgcggggacaagtcttcggggatccattat
ggtgtcatcacctgtgaaggctgtaagggcttcttccggcggagccaacagaacaacgcc
agctactcctgttcccgccaacgaaactgccccatcgaccgcaccagccggaatcgctgc
cagcactgccgcctgcagaagtgcctcgccctgggcatgtcgcgagatgcggtcaagttc
ggccggatgtccaagaagcagcgggacagcctctacgcggaagtgcagcgccatcagcag
agccaggaggcgggccagtccatggacggcggcggcctgctgcccagagacggcgcgcac
gtggccggcagcctttcggacctggaccacctctcgggcctgccagaggggctgctcttt
gacatgccgctcagcccggaagagacggaagcgggcgcggcggcccccacctactacacc
ctggatctgctgggctccgcccagccctccccggagcccacgtgcctggagacgctgtat
gagatgggcctggaccccggggtcctggcgcacagcggcactcccgggatgccgtcggag
cgtgagattgaacgagtggcccagaatgtcatcaggtcccactgggagacctgccagtac
acaacagaagagctgaagaggctagcctgggcccagtacacccaggaggagctgtgcagc
ctgcaggcaaagccctgcgaggtcctgtggcagcagtgctccctccagatctcccacgcc
atccagttcgtggtggagttcgccaagcatatctgcggcttcatggatcttgatcagaat
gaccagatcatcctcctcaaagcaggttgcctggaagtgctgctgatccggatggttcgg
gtcttcaaccctttgaataatactgtgctctttgacggcaaatttggagggatgcagatg
tttaaggctttggcctgtgatgacttaattggagccatctttgagctggagaggggcctg
tgtcgactgcagctgtcagacgaggaaattgctctgttcacagcagctgtcctgttgtcc
ccagaccgaccctggcttcttgaagcgaagaaggtccagaatctccaggaccaagttttc
ctcgctttgcagcacgagatccagaagcagccttctccggaggacaggctgtccaagctg
atctccaagctgcccctgttgaaggctatctgccgcctccacctggataagctggagtgt
ttccgcctcctgcaccccgaaacggcccgcctcttcccccccctctacaaggaggtcttc
aacacggagctccagtacagcgccctccgggaaagctag
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