Antechinus flavipes (yellow-footed antechinus): 127545166
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Entry
127545166 CDS
T08818
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127545166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afz03009
]
127545166
Ribosome biogenesis [BR:
afz03009
]
Eukaryotic type
Pre-60S particles
RNases
127545166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
127545166
NCBI-ProteinID:
XP_051828223
LinkDB
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Position
1:673252047..673363486
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AA seq
1270 aa
AA seq
DB search
MLRSTGFFRAIDCPYWAGAGAGASCCRRPYCHFRHRGSERGPARSEASAAAANGPGPGGG
GAARSAGELGYDPYNPDLPKPSVGTEHGSLGDVPEPSSGILELELVNQAIEAVRNEVERE
EKKYKELLETTKEYGTTETSLVSQSPTGAGVPNPDSFATSLEYNPGSYNLLNNNTDYNPT
PLAAANKCNKYTLDSLEKSKAKGNSLEYVPKSVIQPKKYSRAVPNSKYVIDNSKPSTDLE
YDPLSNYSARLLNKGSPKDQRGVKRRRDSNQDESYTPSLKKHCDVFSNYETDARFSDSED
EDPSSENQPNPASPTKARTSSESQASSGSSPAKGKPLEPEESSLRETKEIAVQYDMGDIQ
RRQSPIGKPPSEKSGKGNKHSSEGREKVAVGDLKCKGSLKDHRVQKRKSHDQKSSGHQEV
ESQKEKSKSSEKDKGKNKDKAKGKLGEKNHREKKLSKVKSDGHISKMEKSKLEKQEVTRK
EKLSAMSVASSGKRKNDGLGKRPSTGKLGNHKKEAKLKPADPPNGKNMSTSNKLKDKKGS
KTSSGRLKDKKSLSLDESSSQGSPKPKKRTLSHIDLFGDESGDEGEGTSPVLPATLPSLS
SDSDSDSDDGSCSLPNESKGPKRLRGAQIATSSSSSSEASDDIDYSILEKELDYDSDPME
ECLRIFNESTDVKTEDKGRLNKQPSKEEKIEGKSEDSLTTLFPGQKRRISHLSKQGNAEV
PSKPVIRPYRPPTAQEACYRRTQLAQKQASDILAGRLATQKHSVSLPEEKRRIAHVPNPR
MATALAAAANSTPTGAKKSNSLNTVQVANGSEPNISLKSRTMSGMASKTSTTSVQKRIAH
MPSLQSVSLNRPVIPTEFGAKVPTNIRQRYLNLFIDECLKFCPSPQEAYDKALSEEKVAY
ERSSSKNIYLNVAVNTLKKLRSLGPGSVQCVNKNSNRKVVSHEAVLGGKLATKTSFTLNR
SGNLRAEDLTGAALYRRLKDYILTEDQLKENGYPLPHPEKPGRAVVFTTEEKKTTDSSCR
ICCRCGTEYLVSPTGNCIRKEECCHHWGRLRRQRVAGGWETQYSCCSGAVGSVGCQVAKQ
HVQDGRKDNLEGFVKTFEKLPSTDGYPGIYALDCEMCYTKQGLELTRITVINSDLKVVYD
TFVKPDNKVVDYNTRFSGVTEEDLQNACITLRDVQAVLLNMFSSDTILIGHSLESDLFAL
KLIHTTVVDTSVVFPHRLGLPYKRALRTLMADYLKRIIQDNVEGHDSSEDASSCMELMIW
KIKEDSKVKR
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctccaccggctttttccgggccatcgactgtccctactgggccggggccggc
gcgggggcgtcctgctgtcggaggccctactgccacttccggcaccgcggctccgagcgc
ggcccggcccggagcgaggcgtccgctgcagccgctaacggccccggccctggcggcggg
ggcgcggcccggagtgcgggagagcttggctatgacccatataaccctgaccttccgaag
ccttcagttggaactgaacatggctccctgggggatgttccagaacccagctctggcatt
ttggagctagagttagtcaaccaggccattgaggctgtccggaatgaagtggaacgagag
gaaaagaaatataaggagctgctagagacaaccaaggaatatggcaccacagagacctca
cttgtttcacaaagccccactggagctggagtgcccaacccagactcctttgccacgtcc
ttagaatataatccaggtagctacaatctattaaataataacacagactataaccctacc
cccttggctgctgctaataaatgtaacaagtatactttggattctttggagaaatccaag
gctaaaggtaactctctggaatatgttccaaagtctgtgatccaacccaaaaaatatagc
cgtgctgttcccaacagtaaatatgtgattgacaattctaagccatccacagatttggaa
tatgaccccctttcaaattactcagccaggcttttaaataagggcagtccgaaggaccag
aggggggtcaaaaggagaagggactcaaaccaagatgagtcctatactccttcgctcaag
aagcattgcgatgtttttagcaattatgaaacagatgccagattttctgactcagaagat
gaggaccccagctcagagaaccagccaaatcctgccagccccacaaaagctagaaccagt
tcagagagtcaggccagcagtgggtcatcccctgctaagggaaagcctctggaacctgag
gaaagtagtttgagggagacgaaggagattgctgtgcaatatgacatgggggatatccag
cggcggcagagtcctattggaaaacccccatcagagaaaagtggaaaaggaaacaaacac
tcttcagaagggagggagaaagtggcagttggggacctaaagtgtaaaggcagcctgaag
gatcacagagtccagaaaagaaaatcacatgaccaaaagagctcaggccatcaagaagtg
gagagtcagaaagaaaaaagtaaatcgtcagagaaagacaaagggaagaataaagacaaa
gcaaaagggaaattaggggagaaaaatcatagagagaagaaactctctaaggttaaaagt
gatggacacataagtaaaatggagaagtccaagttagaaaagcaagaggtgaccaggaag
gagaagttatctgctatgtcagtggccagctcagggaaaaggaagaacgatggccttggt
aagagaccgagcacagggaagctgggaaaccataagaaggaggccaaactgaagccagca
gatcctcccaatgggaaaaacatgtccactagcaataagctaaaagacaagaaaggcagt
aaaacctcttcgggtaggctgaaagacaagaagtccctttctctagatgaaagcagttcc
caaggctccccaaagcctaagaagaggacgttgagccatattgatctctttggagatgag
agtggggatgaaggggaagggacatccccagttcttcctgccaccctcccaagtctaagc
tcagactcagactcagactcagatgatggaagctgtagcctcccgaatgagagtaaggga
ccaaaacgcctccggggtgcccagatcgctacctcttcatcctcatcttctgaggcctcc
gatgacatcgactactctatcctggagaaggaattggattacgattcagaccccatggaa
gaatgtcttcggatttttaatgagtctacagatgtgaagactgaagacaaagggaggctc
aacaaacagccatccaaagaagagaagattgagggaaagtcagaggacagtttgactaca
ttgtttccaggccagaagaggaggatttcccatctctccaagcaaggaaatgctgaagtc
ccaagcaagccagtcattcggccctatcgcccacccactgctcaggaggcctgctaccga
cgaacccagcttgcccagaaacaggcctcagacattcttgcaggaagactggcaacccag
aagcattctgtgtctcttcctgaggagaagaggagaattgcccatgtgcccaatccccgc
atggccacagcactggcagcagcagccaattcaacccccacaggtgccaagaaaagtaat
tctttgaacaccgttcaagtcgcaaatggctctgagccaaacatctccttgaagtcccga
acgatgtctgggatggcttctaaaacgagcacgacatccgtgcagaagaggatagcacat
atgccctccctacagagtgtaagcttaaatagaccagtcattccaactgagtttggggcc
aaggttcccaccaacatccgccaacgttatcttaatctttttattgacgagtgcctgaag
ttttgtccgtcaccccaagaagcttatgacaaggctttatcggaggagaaggtggcctat
gaacggagttcaagcaagaatatctacctgaatgtggctgtcaataccctaaagaagcta
aggagtttaggacctggttctgtacaatgtgtaaacaagaacagcaatcggaaggtggtg
tcccatgaagctgtgctgggagggaaactggccacaaaaacaagctttacactgaatcga
tcgggaaatctcagagcagaagatttgacaggagctgccttgtatcgaagattaaaggac
tacattcttacagaggatcaactgaaagagaacggctaccctttgccccaccctgaaaaa
cctggccgagcggtggtcttcaccaccgaagagaagaagaccacagactcatcctgccgt
atttgctgtcgctgtggcactgagtacctagtctcgcccaccggcaattgtatccggaag
gaggagtgctgccatcattgggggaggctgcgtcggcagagagtggctggtggatgggaa
acccagtatagttgctgttcaggagctgttggttctgttgggtgtcaggttgctaagcaa
catgtgcaagatggccgtaaagacaaccttgaagggttcgtgaaaacctttgaaaaactt
ccctctacagatggatatccaggaatatatgccctcgactgtgagatgtgttataccaaa
caaggcctggagctaacaagaataactgtgatcaactctgatctgaaagttgtctatgac
acatttgtgaaaccagacaacaaagttgtggattacaacacgaggttttctggggtgaca
gaagaagacttgcagaatgcgtgtataacccttcgggatgtccaggcggtattgttgaac
atgttcagttcagacaccatcttgataggacacagcttagaaagtgacttatttgctctc
aagcttattcacaccacagtagtggacacatcagtggtcttccctcaccgccttgggctc
ccctataagagagcactgcggacgctgatggccgactacctcaagcgtattatccaggac
aatgtggaaggccatgattcaagtgaagatgccagttcttgcatggaactgatgatttgg
aaaatcaaagaagactcaaaagtcaagcgatga
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