KEGG   Antechinus flavipes (yellow-footed antechinus): 127545349
Entry
127545349         CDS       T08818                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03030  DNA replication
afz03410  Base excision repair
afz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:afz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127545349
   03410 Base excision repair
    127545349
   03420 Nucleotide excision repair
    127545349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:afz03032]
    127545349
   03400 DNA repair and recombination proteins [BR:afz03400]
    127545349
Enzymes [BR:afz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     127545349
DNA replication proteins [BR:afz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    127545349
DNA repair and recombination proteins [BR:afz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      127545349
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N zf-RRPl_C4
Other DBs
NCBI-GeneID: 127545349
NCBI-ProteinID: XP_051828532
LinkDB
Position
1:complement(680935146..681002550)
AA seq 2289 aa
MVSRERGWRRTEPGEEVENSRDDGSSSSSLSALKRLERSQWTDKMDARFGFERLQEPEEK
TGWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALTYKPYFYIATKKGCEREVSSF
LSKKFQGKIAKLETVPKEDLDLSNHLVGLKRNYIKLSFNTVDDLVKVRKEISPAVKKNRE
RDNTSDTYTAMLSSALMGGSVTTDEEGASKKIADQLDNVVDMREYDVPYHIRLSIDLKIH
VAHWYNVRYRGSSLPIEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
VDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIM
VTYNGDFFDWPFVEARAAVHGLSMHQEIGFQKDSQGEYKSSQCIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEDMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQEFNKLTEDGHVLDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHAIEEEENVPIDQVTNFQEV
CDEIKNKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVNEATCAACDFNKP
GANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDKPARAFHELSREEQAKYE
KKRLADYCRKAYKKIHITKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAMEMGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNI
MVKEGFTNDQYQELTEPTSLTYITRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGNTLEEVYGSVAKVADYWLDVLYS
RAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFI
ISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLMEKHDIYKQKKISELFIHEGKRQVTVNQ
HPEGSQGHGILDMEDLGVTKPLQPAVPIATKRKRVPVESQEESQNLELTQSWREILGQPP
SLGTTKEEWLVWLSFHKKKWELQARQRQERRKRRRVETRDRVLSSGIIRDGPTTGLGHFL
RRTARSILDLPWQIVQISETSQPGLFRLWAVIGNDLHCIKLNIPRVFYVNQRVPKEEDGS
SFRKVNRVLPRSNMVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLLRALI
QLGCVCMVSRQLVQHLTGREAETFSLEYLEMRSLAQFSYLEPGSIRHIFLYHHSQGSRAL
FGLFIPSQRKASVFVLDTVRSNQMPNLNSMYSSEHRLLLEKMGPDLLPPDKHIFEVRAET
DLKTIYRAIQRLLIGYKEERRGPTLIAIQSNWELKRLTTGMPVFEEFPLVPVCVTDDISY
GALDWQRHAARRMIRHYLNLDTCLSQAFEMSRYFHIPVGNLPEDISTFGSDLFFSRHLRH
HNHLLWFSPTSRPDLGGKEADDNRLVMEFDDQASVEINNPGCYSTVCLELDIQNLAVNTI
LQSHHVNDMEGASSMGISFDVIQQASLEEMVTGNQAANIPASYDETALCSNTFRILKSMV
VGWVKEITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLSMMKKLFLQLVAEFKRL
GSSVIYANFNRIILCTKKRRIEDAIAYIDYITNSIHSKEIFHSLTISFSRCWEFLFWMDP
ANYGGIKGKVPSRVHYGEQNTQKEQTAEKEQESEEEEEEEEEEEAEKEMIEESNVEDLLD
NNWNIVQFLPQTASCQSYFLMIISAYIVAVYHSMKEELRRSAPGCTPVKRRGNSQLSQEA
DGVAGALPGMITFSQDYVANELTQNFFTITQKIQKKVMGSRNSTEPSEMFPVLPGSHLLL
NNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVI
CRNCNFCRDLDLCKDPSLSQDASVLPQWLCPNCQTAYDTAHIEMALVEVLQKKLMAFTLQ
DLICLKCKGVKEANMPIYCSCAGDFALTIQTKVFVEQIGIFRSIARHYGMTYLTEMIEWL
LQMNPQLSN
NT seq 6870 nt   +upstreamnt  +downstreamnt
atggtgtcccgggagcgcgggtggaggcgcaccgagcccggggaggaagtcgagaacagt
cgggatgatggctcttcctcctcttcactctctgctctcaagcgattggaacggagtcag
tggacggacaagatggatgcaagatttggttttgaaagattacaagagccagaagaaaag
actggctggctaatcaacatgcacccgactgagattttagatgaagataagcgtttggtc
agtgcagtggattactactttatccaagacgatggcagccgatttaaggtggcattgact
tataagccatatttctacatagcaacaaagaagggttgtgagcgagaagtgtcatctttt
ctctctaagaagtttcaggggaaaattgctaaattggagactgttcccaaagaagatctg
gacttgtcaaatcacttggtgggcttgaagcgaaattacattaaactttctttcaacact
gtggatgatcttgtaaaagtgaggaaggagatttccccggctgtgaagaagaatcgagag
cgggataacaccagtgatacctatacagctatgttgtctagtgcattgatgggcggtagt
gtaactactgatgaagagggggcctctaagaagatcgctgaccagttggacaatgtagtt
gacatgcgagagtatgatgttccttaccacattcgtttgtccattgacctgaagatccat
gtggctcattggtataatgtccgataccggggcagttcccttcccattgaaatcacccga
cgagatgaccttgttgaacgacctgatcctgtagttttggcatttgacattgaaacaacc
aaactgcctctcaagttcccagatgcagagactgaccaaattatgatgatttcttacatg
gtagatggtcagggatacctgatcaccaacagggagattgtctctgaggacattgaagat
tttgaattcacccctaaaccagaatatgagggacccttttgtgttttcaatgaacctgat
gaggctcatttaattcagaggtggtttgagcatgttcaggaaaccaaacctactatcatg
gtgacctataatggtgacttctttgattggccatttgtggaagccagggcagcagttcat
ggactgagtatgcatcaggagattggattccaaaaggatagtcaaggggagtacaagtcc
tctcagtgcatccacatggactgtctcagatgggtaaagagggacagttaccttccagtg
ggcagccacaaccttaaagctgcagccaaagccaagctagggtatgaccctgtggagttg
gaccctgaggatatgtgtcgaatggccactgaggagcctcagacactagctacatattca
gtatcagatgctgttgctacttattacatgtatatgaagtatgtccatcccttcatcttt
gctctctgcaccattatccccatggaaccagatgaggtcctgcggaagggctcggggacc
ttgtgtgaggccttgttgatggtccaggctttccatgccaacatagtttttcctaacaag
caagaacaggagttcaacaaactgactgaagatggccacgtattggactcagagacttac
gttgggggccatgtggaggcactggagtctggcgtcttccgcagtgacattccttgccga
tttaaaatgaatcctgcagcctttgacttcttgctgcagcgtgtggagaagaccatgcgc
catgctattgaagaagaggagaacgtgcccattgaccaggttaccaacttccaagaggtg
tgtgatgaaattaaaaacaaactgacctccctcaaggatgttcccaatcgaattgagtgt
cctctcatataccacctggatgtgggtgctatgtaccccaatattatcctcactaacagg
ctgcagccttctgccatagtgaacgaggccacatgtgctgcttgtgactttaataaacca
ggtgctaattgtcagcgaaggatgacctggcagtggaggggagagttcatgcctgccagc
cgcagtgagtatcatcgtattcagcagcagctggaatcagagaagtttccaccattgttc
ccagacaaaccagcccgggcatttcatgaactgtcccgagaagagcaggctaaatatgag
aaaaagcgactggcagattattgccggaaagcttataagaagatccacatcaccaaagtg
gaagaacgtctcactaccatctgccagcgggaaaactccttctacgtagacactgttcga
gctttccgtgaccgacggtacgagttcaaaggactccataaggtatggaagaagaagctg
tctgctgccatggagatgggagatgctgctgaagtcaagcgatgtaaaaacatggagatc
ttgtatgattccttgcaattggctcacaagtgtatcctcaactctttctatggctatgtg
atgcgcaaaggggctcgatggtattccatggagatggcaggaattgtctgtttcacagga
gccaatatcatcacacaggcccgggagctgatcgagcagattgggagacctctagagctt
gacacggatggaatctggtgtgtcctaccaaatagcttcccagaaaattttgtcatcaag
tcaaccaatgcaaagaagcccaaggtgaccatctcctatcctggagctatgttaaatatc
atggtgaaggaaggcttcacaaatgatcagtatcaagagctcactgagcccacttctctc
acttacatcacccgctcagaaaacagcatcttctttgaagtagatggtccatacctcgct
atgattcttccagcttccaaggaggaagggaagaaactgaagaaaagatatgctgtgttc
aatgaagatggctccctggctgagctaaagggctttgaggtcaaacggcgtggagaacta
cagctgattaagatcttccagtcgtcagtgtttgaagcattcctaaagggcaataccttg
gaggaggtctatgggtctgttgccaaagtagcagattattggctagatgtgctctacagc
agggcggccaacatgccagactcagaactatttgaactgatctctgaaaaccgctccatg
tctcggaaactggaagactatggagagcaaaaatccacatccatcagtacagccaagaga
ctggccgagttcttgggagatcagatggtgaaggatgctgggctaagctgtcgcttcatc
atttcccgcaaacctgaagggtctccagtcacagagagggccatcccacttgctattttc
caagcagagcccacagtaagaaaacacttcctccggaaatggctcaagagctcttcccta
caagactttgacattcggacaatcctggactgggattactacatcgaaagacttgggagt
gccatccagaagatcatcaccattcctgcagccctgcagcaggtgaagaacccagtacca
cgtgtccgacaccctgattggctacataagaagctgatggagaagcatgatatatataag
cagaaaaagatcagtgagctttttattcacgagggcaaaagacaggtcactgtcaatcag
catccagagggtagccagggacatgggattctggatatggaggacctcggtgtcaccaag
ccattgcagccagcagtcccgattgctaccaaaaggaagagagtccctgtagagagccaa
gaggagtcccagaatttagagttgacccagtcttggcgagaaattttaggacagccacca
tctcttggtacaaccaaggaagagtggctcgtgtggctctccttccataagaagaagtgg
gagctacaggcccgtcagcgccaagaacgcaggaagagacggcgtgtagagactagagac
agggtgctgagctcaggcatcattcgtgacggcccaaccacaggactagggcacttcctg
cggagaacagcccgcagcatcctggacctaccttggcagatcgtgcagatcagtgagacc
tcccaacctggcctgttcagactttgggctgtcattggcaatgatctacactgtatcaag
ctgaatatcccccgtgtgttttatgtgaaccagcgtgtacctaaggaggaagatggatct
tctttccgtaaggtgaacagagttctccctcgttccaacatggtctacaatctgtatgag
tattcagtgccagaggacatgtatcaggaacacatcaatgagatcaatgctgatttgtct
gcaccagacattgaaggcgtctatgagacccaggtgccgttgctgctccgggctctcatc
caattaggctgtgtgtgtatggtcagtagacagctggtacagcacctcacgggccgagag
gccgaaaccttctctctagagtacttggaaatgcgttccttggcgcagttcagctacctt
gaaccaggaagcatccggcacatctttctgtatcaccactctcagggcagcagggcgctt
tttgggctcttcatcccctcccagcgcaaagcttctgtgtttgtcttagatacagtgcgc
agtaaccagatgccaaacctgaattccatgtattcatcggagcaccgcctcctgttggaa
aagatgggacccgacctcctacccccagacaagcacatttttgaagtgcgagctgagact
gacctgaagaccatctacagagccattcaacgactattgattggctacaaggaagaacgc
cggggtcccactctcattgctatacagtctaactgggagctgaagaggctgaccactggg
atgccagtctttgaggagttcccattggttccagtctgtgtgactgatgacattagctat
ggggccttggactggcagcgtcacgcagcccggcgcatgatccggcactatctcaacttg
gacacttgcctgtctcaggcatttgagatgagtagatattttcacattcctgttgggaat
ctcccagaagatatctctacctttggttcagatctcttcttctctcgccacctccggcac
cataatcatctgctctggttttctcctacatcccgccctgacttaggtgggaaagaagct
gatgacaatcgccttgtcatggaatttgatgatcaagcttccgtggaaataaacaatcct
gggtgttactccaccgtgtgcttggaattggacatccagaacttggcagtaaataccatc
ttgcaatctcaccatgttaatgatatggaaggagcgtccagcatgggcatcagcttcgat
gtcatccagcaagcctctctggaagaaatggtcacagggaaccaggcagccaacatccca
gccagctatgacgagaccgccctctgctctaacacattcaggatcttaaagagcatggta
gtgggctgggtgaaggagatcactcaataccacaacgtctatgctgacaatcaagtgatg
cacttttaccgctggctccggtccccatcctctctcctgtatgaccccgctttgcaccgg
actctacttagcatgatgaagaagctctttctccagcttgtagctgagttcaaacgtcta
ggctcctcagtcatttatgccaacttcaatcgcatcatcctctgcaccaaaaagcgtcgc
attgaggatgccattgcctacatagactacatcactaacagcatccactccaaagagatc
ttccattccttgacgatctccttctcccggtgctgggaatttcttttctggatggatcct
gctaactatggaggaatcaaaggaaaagttccatcccgcgttcactatggggagcaaaac
acccagaaagagcagacagcagagaaagaacaagagagtgaggaagaggaggaggaagag
gaagaagaagaagcagagaaggagatgatagaagaatctaatgtggaagacttgttggat
aacaactggaacattgtacagtttcttccccagacagcctcttgccagagctactttctc
atgattatctcagcatatattgtggctgtgtaccacagcatgaaagaggaattaagacga
agtgctcctgggtgcacccccgtcaagaggagggggaacagccagttgtcccaggaggct
gatggggtagctggggctcttcctggaatgatcaccttctcccaggattatgtagccaat
gagctcacccagaacttcttcaccatcacccagaagatccaaaagaaagtgatgggctcc
cgcaactccacagagccctccgagatgttcccagtcctccctggctcccacttgctgctc
aacaaccctgccctggagttcataaaatatgtgtgcaaggtgctctcactggacaccaac
atcaccaatcaagtgaacaagctgaaccgcgatctcctgcggctcgtggacgtgggcgag
ttctcagaggaggctcaattccgggacccctgccgctcctacgtgctccctgaagtcatc
tgccggaactgcaacttctgccgcgacctggacctctgcaaagacccctccctctctcag
gatgcctcggtcttgcctcagtggctttgccccaactgccagaccgcgtatgacactgcc
cacattgagatggccttggtagaagttctgcagaagaagctgatggcctttaccctgcag
gacctgatctgcctcaagtgtaaaggggtgaaggaggccaacatgcccatctactgcagc
tgtgccggagactttgccctgaccatccagaccaaggtctttgtggagcagatcggcatc
ttcaggagcattgctcggcattatggcatgacctacctgacagagatgattgagtggctg
ctacagatgaacccccagctttccaactag

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