Antechinus flavipes (yellow-footed antechinus): 127545395
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Entry
127545395 CDS
T08818
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afz03009
]
127545395
Enzymes [BR:
afz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127545395
Ribosome biogenesis [BR:
afz03009
]
Eukaryotic type
Pre-60S particles
Helicases
127545395
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127545395
NCBI-ProteinID:
XP_051828615
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All DBs
Position
1:complement(692416800..692429012)
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AA seq
601 aa
AA seq
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MDHVTEGAWETLPVPLHPEVLAALRELDFPRMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPILQILLRREEKLKKMQVGAIIITPTRELAIQINEVLLHFSKHFPQFSQILLIGG
RNPGEDVERFKEQGGNIIVATPGRLEDMFRRKAEGLDLANCVKSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAATSTQKTPS
RLENYYMVCKADEKFNQLVHFLRNHKEEKHLVFFSTCACVEYYGKALEALVKNVKILCIH
GKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGRAGSALVFLLPMEESYVNFLSINQKCPLQEMKPQKNPADLLPQLKSMALADRAVFEK
GMKAFVSCVQAYAKHECNLIFRLKDLDFASLARGFALLRMPRMPELKGKQFPDFVPVTID
TDTIAFKDKNREKQRQKFLEQQRKEKKENEGRKKFVKNKAWSKQKAKKEKKKKMTEKRKR
EEDFDIEDEDMQELLNDTRLLKKLKKGKMSEEEFEKRLLAHDKGKAHLEHLGSSDLDGDD
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggaccatgtgacggaaggcgcctgggagacgctgccggtgccgctacacccagaggtg
ctggcggctctgcgcgagctcgacttcccccgcatgacgcccgtgcagtctgcaaccata
ccgctctttatgaaaaacaaagatgtggctgcagaagctgtcacagggagtggcaaaaca
ctggcttttgtcattcccatcctgcaaattttgctgaggagggaagagaagttaaaaaaa
atgcaggttggagctatcatcatcacacccacaagagagcttgccatccagatcaatgaa
gtgctgctacatttttctaagcacttcccacaatttagccagattcttttaattgggggt
aggaacccaggagaagatgttgagaggtttaaagaacaaggtggaaacatcatagttgcc
actccaggtcgcttggaggacatgttcaggagaaaggccgaaggtttggatttggcaaat
tgtgtgaagtcccttgatgtcctagtgttggatgaagcagaccgtcttttggacatgggg
tttgaagccagtataaataccattctggaatttttgccaaagcagaggagaacaggcctc
ttctctgccactcagactcaagaggttgagaacctggtgagggctggccttcggaatcct
gtccggatttcagtgaaagagaagggggtggcagctaccagcactcagaagacccctagt
cgcctggagaactactacatggtctgcaaagcagatgagaaatttaatcaacttgtgcat
tttctccgaaatcataaggaagaaaaacacctggtattcttcagtacttgtgcctgtgtg
gaatattatggaaaggctcttgaagccctggttaaaaatgtaaaaatattgtgtattcat
gggaagatgaaatataaacgcaataagatattcatggagtttcgtaaactgcaaagtggt
attttagtgtgcactgatgtgatggcccgggggatagacattcctgaagtaaattgggtt
ttgcagtatgacccacctagcaatgcaagcgctttcgtgcatcgctgtgggcgcacagcc
cggatcggccgggccggcagcgccctggtgttcttgcttcccatggaagaatcctatgtc
aatttcctttctatcaaccaaaagtgtcccctgcaggagatgaagccgcagaaaaaccca
gctgaccttcttccccagctgaagtcaatggctttggcagaccgagcagtatttgaaaag
gggatgaaagcttttgtgtcttgtgtccaagcctatgcaaagcacgaatgcaatctcatc
ttccgattaaaagatctagattttgctagtcttgcccgaggttttgccctattacggatg
cccaggatgccagagctaaaaggaaaacagtttccagattttgtgcctgttactattgat
acagacactattgcctttaaagataaaaacagagagaaacagagacagaaatttctagag
caacaaagaaaagaaaaaaaagaaaatgaagggagaaagaaatttgtcaagaacaaagcc
tggtcaaagcagaaagccaagaaggaaaagaagaaaaaaatgactgaaaagagaaaaaga
gaagaggattttgatattgaagatgaggacatgcaagagctgctcaatgatacaagactc
ttgaaaaagttgaaaaaggggaaaatgagtgaagaagagtttgagaagagattgttggca
catgacaaaggcaaggcccatcttgagcacttggggtcctcggatctggacggtgatgac
agctga
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