Antechinus flavipes (yellow-footed antechinus): 127545396
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Entry
127545396 CDS
T08818
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03022
Basal transcription factors
afz03420
Nucleotide excision repair
afz05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127545396
09124 Replication and repair
03420 Nucleotide excision repair
127545396
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
127545396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afz03021
]
127545396
03400 DNA repair and recombination proteins [BR:
afz03400
]
127545396
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127545396
DNA repair and recombination proteins [BR:
afz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127545396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
127545396
NCBI-ProteinID:
XP_051828616
LinkDB
All DBs
Position
1:complement(692390103..692405922)
Genome browser
AA seq
310 aa
AA seq
DB search
MISEDDELNLLVIIVDTNPIWWGKQALKESQFTLSKCIDAVMVMGNSHLFMNRSNKLAVI
ASHIQESRFLYPGKNWKFGDLFGDPGSSSAEYNPSGSKDGKYELLTAANEVIAEEIKDLM
TKSDMEGQRTETLLAGSLAKALCYIHRMSKEVKDNQEMKSRILVIKAAEDSALQYMNFMN
VIFAAQKQNIVIDACVLDTDSGLLQQACDITGGIYLKVPQMPSLLQYLLWVFLPDQDQRS
QLNLPPPIHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKA
KKKKLKASSL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatttccgaagatgatgaattaaatcttctggttatcatcgttgacacaaacccaatt
tggtggggaaaacaagctttgaaagaatcccagttcacattatcaaaatgtatagatgct
gtcatggtgatgggaaattctcacttatttatgaatcgttccaacaaacttgctgtgata
gcaagtcatattcaagagagtcgattcttgtatcctgggaagaactggaaatttggagac
ttatttggtgatcctggcagcagctctgccgaatataatccttctggtagtaaggatgga
aaatatgagttattaactgcagcaaatgaagtgattgctgaagagattaaagatcttatg
accaaaagtgacatggaaggacaacgtacagaaacattgctggcaggatctcttgcaaaa
gcactttgttatattcacagaatgagcaaggaagtaaaagataaccaagaaatgaagtca
agaatattggtcattaaggctgcagaagacagtgctttgcaatatatgaacttcatgaat
gtcatctttgcagcacagaaacagaatattgtgattgatgcttgtgtcttagatactgat
tcaggactcctccaacaggcctgtgacattacagggggcatatacttgaaggtgccccag
atgccatcgcttcttcagtatttattgtgggtatttcttcctgatcaagaccaaaggtct
cagttaaacctcccacctcccattcacgttgactatagagctgcttgcttttgtcataga
aatctcattgaaattggttatgtctgctctgtatgtttgtcaatattctgtaatttcagt
cctatttgcaccacatgcgagacagcttttaagatttcactacctcctgttctgaaagca
aagaagaagaaattaaaagcatcttccttgtga
DBGET
integrated database retrieval system
