Antechinus flavipes (yellow-footed antechinus): 127545474
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Entry
127545474 CDS
T08818
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin 2/2L
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz05014
Amyotrophic lateral sclerosis
afz05017
Spinocerebellar ataxia
afz05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127545474
05017 Spinocerebellar ataxia
127545474
05022 Pathways of neurodegeneration - multiple diseases
127545474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127545474
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127545474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
127545474
NCBI-ProteinID:
XP_051828744
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Position
1:complement(696646356..696718150)
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AA seq
1050 aa
AA seq
DB search
MRMVHILTSVVGSKCEVQVKNGGVYEGVFKTYSPKCDLVLDAAHKKTTDSSPGPKREDIV
ERILFKCSDFVVVQFKDMDSNYARRDAFTDSAISAKVNGEHKEKDLEPWDGGETATTEEF
EALETDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLA
EEIESSAQYKARVALENDDRSEEEKYTAVQRNASDREGHSINTRESKYIPPGQRTRDVMT
WGSGRQNSPRMGQPASGPTPSRSGSHTSEFNLNSAADQRVVNGGVPWPSPCPSPSSRPPS
RYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSP
KAQRHPRGHRVSTGRGSISSGLEFVSHNAPGEVSAPPVARSSPSGGTWSSVVSGVPRLSP
KTHRPRSPRQNNIANTPPGPILSSPQAGTVPTESVAVPVPAASPTPANLASNRAVTPSSD
AKDSRLQDQRQNSPAGNKENIKPSETSPSFVKAENKGISPIVSEHRKQIDDLKKFKNDFR
LQPSSTPDNVDHLLNKNREGEKSRDMIKDQPEPSSKDILLENISAGCPSSSSKPSSPCIS
PSASGSSDQKRGPEVTSQGVQTASPGNKHEKEDQEDKKDAAEQVRKSTLNPNAKEFNPRS
FAQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIP
MTPMPVNQAKTYRAGKVPNMPQQRQDQHPQNTLMHPASAAGPPIVATPPAYSAQYVAYSP
QQFPNQPLVQHVPHYQSQHPHVYSPVIQGNTRMMAPPTHAQPGLVSSSAAQYGAHEQTHA
MYACPKLPYNKETGPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQNQHSG
SHTAPSPVQHHQHQAAQALHLANPQQQPAIYHAGLAPTPPSMTPGSNTQSPQNSFPAAQQ
TVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAAIAQ
SALQPIPVSTTAHFPYMTHPSVQAHHQQQL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggttcatatacttacatcagttgttggatccaaatgtgaagttcaagtgaaa
aatggaggtgtatatgaaggagtttttaaaacatatagtcctaagtgtgatttagtgctc
gatgctgctcataagaaaaccacagattccagccctgggccaaagcgtgaagatatcgtg
gagaggattttgttcaagtgttcagactttgtagtggtacagttcaaagacatggattcc
aattatgccagaagagatgcttttactgattcagctatcagtgctaaagtaaatggcgaa
cacaaagagaaggaccttgaaccatgggatggaggtgaaactgctactactgaagagttt
gaggctttagagactgatgtttctaatggatgggatcccaatgatatgtttcgatataat
gaagaaaattacggtgtagtttccacctatgatagcagtttgtcatcatatacggtacca
ttagaaagagataactcggaagaatttttaaaacgggaagcacgagcaaaccagttagct
gaagaaattgaatcaagtgctcaatacaaagctcgggtagcccttgaaaatgatgataga
agcgaagaagaaaaatatactgctgttcagagaaatgccagtgaccgtgaggggcacagc
atcaacactagagaaagcaagtacattccacctggacaaagaacccgagatgtcatgact
tggggaagtggtagacaaaattcaccaaggatgggccagcctgcatctggtcccacccca
tccagatctggatctcatacttcagagtttaacctgaattctgcagcagaccaaagagtc
gttaatggaggtgttccctggccatcgccttgcccatctccttcctctcgcccaccttct
cgctaccagtcaggtcccaactctcttccacctcgggcagccacccctacaaggccgccc
tccaggcccccctcgaggccatccagacccccgtctcacccctctgctcatggttctcca
gctcctgtctctactatgcctaaacgcatgtcttcagaaggaccgccaaggatgtcgcca
aaggcccaaagacaccctcgtggtcaccgagtttctactgggaggggctcaatctccagt
ggtttagaatttgtttcccataatgcaccaggcgaagtatctgctcctcctgtagcacgg
agtagcccctcaggaggaacatggtcatcagtggtcagtggggttccaagattatctccg
aaaacacacagaccgaggtctccaaggcaaaacaatattgcaaatactcctcctggtcca
attctctcttctccccaagctgggactgtgcccacagaatctgttgctgtgcctgtgcca
gctgcatctcctacacctgccaatcttgcttccaaccgagcagttaccccatctagtgac
gctaaagattctaggcttcaagatcagaggcaaaattcaccagctggaaacaaagaaaat
attaagccgagtgagacctccccaagctttgtaaaagcagaaaataaaggtatatcaccc
attgtttcagaacatagaaaacaaattgacgatttaaagaaatttaagaatgattttagg
ttacagccaagttccacccctgacaatgtggatcacctgctcaacaaaaacagagaagga
gaaaagtcgagagatatgatcaaagaccagcctgaacccagctctaaggacattctcctg
gagaatatcagtgctggctgcccaagcagcagcagcaagccaagcagcccttgcatttct
ccatcagccagtgggagctccgaccagaagagaggtccggaggtcacttcccaaggtgtg
cagactgccagtccggggaataaacacgagaaggaggatcaagaagacaaaaaagatgca
gccgagcaagttaggaaatctacattgaatcccaatgccaaggagttcaatccacgttct
tttgctcagccaaagccttcaacaactcctacttcccctcgtcctcaagctcagccaagc
ccttctatggtgggtcatcagcagccaactccagtatatactcagccagtttgttttgca
ccaaatatgatgtacccagttccagtgagcccaggcgtgcagcctctgtatcctatacct
atgacgcctatgccagtgaaccaagccaagacatatagagcaggtaaagtaccaaatatg
ccccaacagcggcaagatcagcacccccagaacaccctgatgcaccctgcctcagctgca
ggcccgcccatcgtggccacaccgccagcctactcagcacaatatgtggcctacagccct
cagcaatttcccaatcagcctcttgttcagcatgtgccacattatcaatctcagcatcct
catgtctatagtcctgtgatacagggtaatactagaatgatggccccgccaacccatgcc
cagcctggtttagtatcctcctcagcagctcagtatggtgctcatgagcagacacatgcg
atgtatgcatgtcccaaattaccatacaacaaggagacaggcccttctttctactttgcc
atttctactggttcccttgctcagcagtatgctcatcctaatgctaccctgcacccacat
actccacatcctcagccttctgccacccctactggacaacaacagaaccaacattcggga
agccacactgcacctagccctgtgcagcaccatcagcaccaagctgcgcaggcccttcat
ctggcaaacccccagcagcagccggccatttaccatgccggtctggcaccgaccccacct
tctatgacaccgggctcaaatacacaatctccacaaaatagtttcccagcagcacaacaa
acagtctttacgattcacccctctcatgtccagcctgcatataccaacccaccccacatg
gcccacgtacctcaggctcatgtacagtcaggaatggttccttctcatccaactgctcat
gctccaatgatgctaatgacgacccagccacctggcggtccccaggccgccatcgctcaa
agtgcactacagcccattccagtctcgacaacagcgcatttcccttatatgacgcaccct
tcagtacaagcccaccaccaacagcagttgtaa
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