Antechinus flavipes (yellow-footed antechinus): 127545653
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Entry
127545653 CDS
T08818
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127545653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127545653
03041 Spliceosome [BR:
afz03041
]
127545653
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127545653
Spliceosome [BR:
afz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127545653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF4175
Motif
Other DBs
NCBI-GeneID:
127545653
NCBI-ProteinID:
XP_051829033
LinkDB
All DBs
Position
1:complement(714325051..714351835)
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AA seq
705 aa
AA seq
DB search
MEAQEKEKSAMSTESNKKRKPKVIRSDGAPSEGKRNRSELDLDMKYYSEEAEVDIRDPNK
DYDLYRFTCHELQRLMAEIQELKSRGSRDSASEIEERRIQSCVHFMTLKKLNRLAHIRLK
KGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSMEEFYREAP
PEISKSEITMGDPHQQTLARLDWELEQRKRLAEKYKECLANKEKILKEIEVKKEYLSSLQ
PRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACAYMKPSSQ
PPRQDKKLSVAIEGSVEEAKALYKPPEDSQDDESDSDAEEEQSTKRRRPTLGVQLDDKRK
EMLKRHPLSVMLDLKCKDDSVLHLTFYYLMNLNIMTVKARVSTATEIVTPVSAGDLLSPD
MILSCLYPGDHGKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQ
HTVTADNSLSASHMETTMKLLRTRLQARLALTKQYASLEHGIVPVSSECQSLFPAKIVSR
LVKWVAIAYEDYVDLPYTRDIVEAGLAEDTHLYYLALIERGTAKLQVAVVLNPGYSSIPP
IFRLCLNWKGEKTSSNDDNIRAMESEVSVCYRELYGPKPGHQLLTNQLQRLCVVLDVYLE
TESHDTSVEGPKEFPQEKMCLRLVRGPSRMKPFKYNYPQGFFSHR
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaagcacaagagaaagagaagtcagccatgtccacagaatcgaacaaaaagcggaaa
cccaaagtgatccgaagtgatggagccccatctgaagggaaacggaatcggagtgagctg
gacttggacatgaagtactatagtgaggaggccgaggtggacattcgagaccccaacaag
gactatgacctctacaggttcacctgccatgaactccagcgactcatggctgaaatccaa
gagctcaagagcagaggcagcagggatagtgcgtccgaaatagaagaaaggaggatccag
agctgtgttcactttatgaccctgaagaaactgaaccgactggctcacatcagactgaag
aaggggcgagatcagactcatgaggctaagcagaaagtggatgcctatcacctccagctc
cagaacctgctgtatgaggtgatgcacctgcagaaagagatcaccaagtgcctcgaattt
aagtcaaagcatgaagaaatagagctggtaagtatggaagagttttaccgggaggctcct
cccgagatcagcaaatctgagatcaccatgggggaccctcaccagcagacccttgctcgc
cttgactgggagctggagcagcggaaaaggttggcagaaaagtacaaagaatgtcttgcc
aacaaagagaagatcctgaaggagattgaagtcaagaaggaatacctgagcagccttcag
cctcggcttaatagcatcatgcaggcctcgctccccgtgcaggagtacctctttatgccg
ttcgaccaggcccacaagcagtatgagaccgcccggcacctccccccgcccctttacgtg
ctctttgtgcaggccagtgcttacggccaggcctgtgcttacatgaaaccttcctcccag
ccccctaggcaggataagaagctgtcggtggccatagagggcagcgtggaggaagccaag
gctctgtacaagccgcccgaggattctcaagatgatgagagcgactcggacgccgaggag
gagcagagcacaaaacgtcgacgccccactctgggtgttcagctggacgacaagcggaag
gagatgctcaagagacacccgctgtcagtcatgctcgacctcaagtgcaaagatgacagc
gtgctccatctgactttttactacctcatgaacctgaacatcatgaccgtgaaggccaga
gtgagcacggccacggagatcgtcaccccagtcagcgcgggtgacctgctgtctcctgac
atgatcctgagttgcctgtaccctggggatcacggcaagaagacccccaacccagccaac
cagtaccagtttgataaagtcggcatcttgaccctgagtgactacgtgctggaactgggg
cacccctatttgtgggtgcagaagcttgggggcctgcacttccccaaggagcagccacag
cacacggtgaccgcggacaactcgctgagcgccagccacatggagaccaccatgaagctg
ctgaggacgcggctgcaggcccgcctggctctcaccaagcaatacgcctccttggagcac
ggcattgtgccagtcagcagtgagtgccagagccttttcccggcaaaaatcgtgtcccgc
ctcgtgaagtgggtggcgatcgcctatgaggattatgtggacctgccttacacccgggac
attgtggaagcggggctggcggaggatacacacctgtattacctggcactcattgagaga
ggaacagccaagcttcaggtggccgtggtgctgaaccccggctactcttccatccccccc
attttccgactttgtctgaactggaaaggagagaagaccagcagcaacgacgacaacatc
cgggccatggagagcgaggtcagtgtgtgttaccgggagctttatgggcccaagcctggt
caccagctcctgaccaatcagctgcagcgtctgtgcgtcgtgctggatgtttacctggag
accgagagccatgacaccagcgtggaagggcctaaggagtttccccaggagaaaatgtgt
ctccgactggtcaggggtcccagccggatgaagccattcaagtacaactatccgcaggga
ttcttcagccatcgttga
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