Antechinus flavipes (yellow-footed antechinus): 127545988
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Entry
127545988 CDS
T08818
Name
(RefSeq) eukaryotic initiation factor 4A-III-like isoform X1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03013
Nucleocytoplasmic transport
afz03015
mRNA surveillance pathway
afz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127545988
09122 Translation
03013 Nucleocytoplasmic transport
127545988
03015 mRNA surveillance pathway
127545988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127545988
03041 Spliceosome [BR:
afz03041
]
127545988
03009 Ribosome biogenesis [BR:
afz03009
]
127545988
03012 Translation factors [BR:
afz03012
]
127545988
Enzymes [BR:
afz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127545988
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127545988
mRNA cycle factors
Stress granule specific factors
127545988
Spliceosome [BR:
afz03041
]
Complex C
Other components
EJC/TREX
127545988
Ribosome biogenesis [BR:
afz03009
]
Eukaryotic type
90S particles
Helicases
127545988
Translation factors [BR:
afz03012
]
Eukaryotic type
Initiation factors
eIF-4
127545988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
127545988
NCBI-ProteinID:
XP_051829423
LinkDB
All DBs
Position
1:274194212..274218253
Genome browser
AA seq
449 aa
AA seq
DB search
MTAQRFSSFCAHFSEVSACAREQFVAPPPTLFSGFPGSMAASATMATSGSARKRLLKEED
MTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQS
QSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIG
GTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIY
DVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREE
WKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKE
FRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVK
NDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgcagcgattcagctctttttgtgcacatttttctgaggtctcagcttgcgcg
cgcgagcagttcgttgcccctccccctacccttttttccggctttccgggaagtatggct
gcctcagccacgatggctacttcaggttctgcccgaaagcgtttgctgaaggaggaagac
atgaccaaagtggaattcgagaccagtgaagaggtggacgtgacacccaccttcgacacg
atgggtttgcgggaggacctgttgcgtggcatatacgcctacggttttgagaaaccatca
gctatccaacagcgtgctatcaaacaaattattaaaggaagagatgtcattgcacagtct
caatctggtacaggcaaaacagcaacatttagcatttcagttctccagtgtttggatatt
caggtgcgagaaacccaggctttgatattagccccaaccagggaattagctgtccaaatt
caaaagggtctgcttgctctaggtgattacatgaatgtccaatgtcacgcctgtattggg
gggacaaatgttggtgaagatatcaggaaattggattatgggcagcatgttgttgctggt
acaccagggcgtgtatttgatatgattcgtcgcagaagtttaagaacccgtgctatcaag
atgttggttttggatgaagctgatgaaatgcttaataaagggttcaaggaacaaatttat
gatgtgtacagatacttgcctccagctactcaggtggttttaatcagtgctacattgcct
cacgaaatcttagaaatgaccaacaaattcatgactgatccaattcgcatcttggtaaaa
cgtgatgaattgactcttgaaggaatcaaacaattttttgtggcagtggaaagggaagaa
tggaaatttgatactttatgtgatctttatgatacattgaccatcactcaagcagtcatc
ttttgtaataccaaaaggaaggtagactggctaactgaaaagatgagagaagccaacttc
actgtttcatcaatgcatggagacatgccccagaaagagagagagtctatcatgaaagag
tttagatctggtgcaagccgagtactcatttctacagatgtgtgggccagaggattagat
gttccccaagtctctctgatcattaattatgacttacccaataacagagaattatatata
cacagaattgggagatcaggtcgatatggccgaaagggtgttgcaattaattttgtcaag
aatgatgatatacgtattctcagagatattgaacagtactattcaacacaaattgatgaa
atgcccatgaatgttgctgatcttatctga
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