Antechinus flavipes (yellow-footed antechinus): 127546296
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Entry
127546296 CDS
T08818
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04512
ECM-receptor interaction
afz04514
Cell adhesion molecule (CAM) interaction
afz04820
Cytoskeleton in muscle cells
afz05144
Malaria
afz05205
Proteoglycans in cancer
afz05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127546296
04514 Cell adhesion molecule (CAM) interaction
127546296
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127546296
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
127546296
09174 Infectious disease: parasitic
05144 Malaria
127546296
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
127546296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127546296
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
afz04090
]
127546296
00535 Proteoglycans [BR:
afz00535
]
127546296
Membrane trafficking [BR:
afz04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
127546296
CD molecules [BR:
afz04090
]
Proteins
127546296
Proteoglycans [BR:
afz00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
127546296
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
FeoB_associated
Motif
Other DBs
NCBI-GeneID:
127546296
NCBI-ProteinID:
XP_051829453
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Position
2:4073071..4089872
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AA seq
396 aa
AA seq
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MARLPLGVRTPIRLRLRPPARSRSPPPELREASQQRQRTESEEPRPRQPAPGRLQQRAKP
EQALPRLRPRRGRPAAAAEPRAHPGGGPAQSSARSRARRGGGGSSIMPGAAAALLALCAL
ALCGQPARSQALATGVPPEDLDGSGDDDDGFSGSGAGAFPRTSVFGLSLLPSKTPVLTST
LTSAPAQPPPSSPGGAAPEASSVESVLLLGGLPEPRPAPSQEETLSASPAGTFHPPTHWP
LTVGATGALDPALGLPMAPSPEFPSSGDEGLLASAPGSGQPEGSFNQHPVEESSGSGSDD
FTFAPSGDNPTTSLERKKDVVLPKGATGASQGILDRKEVLGGVIAGGLVGLVLAAVLVGF
MLYRMRKKDEGSYSLEEPKQANGAYQKPQRQEEFYA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcttgcccctaggagtccgtaccccgatccggctgcgcctccgcccgcctgcc
cgctcccgctcgcccccgcccgagctccgggaggcgagccagcagcgccagcgcacggag
agcgaggagccccggccccgccagcccgcccccggccggctgcagcagcgcgcgaagccc
gagcaggcgctcccccggctccggccccggcgcgggcgtccagcggcagcggccgagccc
cgagcccaccccggcggcggccccgctcagtcctcggcccggagtcgagcccggcgcggc
ggcggcggctccagcatcatgcccggcgcggcggcggcgctgctggcgctgtgcgccctg
gcgctctgcgggcagccggctcgctcgcaggccctggccacgggcgtccctccggaggac
ctggacggctctggcgatgacgacgacggcttctccggctccggggcgggggccttccct
aggacctcagtgttcggcctgagcctcctgcccagcaagactcccgtgctcaccagcacc
ttgaccagcgctccggcccagcccccgcccagcagcccggggggagcagccccagaagcc
tcctcggtggaatctgtgctcttgcttggagggctgcccgagccccggccggcccccagc
caggaggagaccctctccgcatctccggccgggacgtttcacccccccacccactggcct
ttgacagtgggagccaccggggccctggaccccgctctggggctcccaatggcgccttcc
cccgagttcccgagctctggagacgaaggcctcctggccagcgccccagggagcggccag
cccgagggaagcttcaaccagcatccagtggaggagagctcgggaagcgggagcgatgac
ttcacctttgccccctccggagataaccctacgacctccctggagaggaagaaagacgtt
gtcctgcccaagggcgccacgggagcctcccagggcatcctggaccgcaaggaggtctta
ggaggggtcatcgccggcggcctggtgggcctggtcttggccgcagtcctggtcggcttc
atgctctaccggatgaggaagaaggacgaaggcagctactccctggaggagcccaagcag
gccaacggcgcctaccagaagcctcagcgccaggaggagttctacgcctga
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