Antechinus flavipes (yellow-footed antechinus): 127547339
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Entry
127547339 CDS
T08818
Name
(RefSeq) neurofilament medium polypeptide
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz05014
Amyotrophic lateral sclerosis
afz05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127547339
05022 Pathways of neurodegeneration - multiple diseases
127547339
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afz04812
]
127547339
Cytoskeleton proteins [BR:
afz04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
127547339
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Extensin_1
DUF1664
ATG14
Motif
Other DBs
NCBI-GeneID:
127547339
NCBI-ProteinID:
XP_051830124
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Position
2:complement(18159214..18165213)
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AA seq
905 aa
AA seq
DB search
MSYALESLGAPAAYRRVTETRASYSRTSGGSPSSGFRSQSWSRGSAGGGSLSSSAMSVSY
KRSIPRSAYGGLGSALLSSAESSLDFSQSSSLLNGTGAGMGVDFKLVRANEKEQLQGLND
RFAGYIEKVHSLEQQNQEIEAEIQALRQKQASHAQLGDVYEQELRELRAGLEQVNHEKAQ
VQLESEHLEEDIHRLKERFDEEARLRDDTEAAVRALRKDIEEASLVKVELDKKVQSLQDE
VAFLRSNHEEEVADLLAQIQASHITVERKDYLKTDITSALKEIRSQLECHSDQNMHQAEE
WFKCRYAKLTEAAEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEE
RHNHDLSSYQDTIHQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEET
RFSTFSGSITGPFYTHRQPSVTISSKIQKTKVEAPKLKVQHKFVEEIIEETKVEDEKSEM
EDALAAIEAELASSAMKEEEEKEEEEAAEEEEIVATKKAAVEAAAPEAEEGEEEGEKEEG
EEEAEEEEEEDEGAKSDQAEEGGSEKEGSSEKDEGEQEEGETEAEGEELEAKEEKTEVKT
KEKVVIKELVVESTSVKTEKAKSPVALSPPAKSPIAKSPAALSPPAKSPTAKSPAALSPP
EKSPTAKSPAALSPTAKSPMPKSPMPKSPMPKSPVEEVKAKAEEDKEEAAVAAGEKESPK
EEKKEERAKEVPEKKKADSPVKETVVEEVDTVTKSAKVGSEKEVEEEEGGSEEGSDQGSK
GSTKEDIAINGEVEGKEEEEEEQETKEKGSGREEEKGVVTNGLDLSPAEEKKEGDKSEEK
VVVTKKIEKITSEGGDGATKYITKSVTVTQKVEEHEETFEEKLVSTKKVEKVTSHAIVKE
VTQSD
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgcgctggagtcgctgggcgcgccggccgcctaccggcgggtcaccgagacc
cgcgccagctacagccgcactagcggcggctcgccgtccagcggcttccgctcccagtct
tggtcccgcggctccgccggcggcggcagcctgagcagctcggccatgtccgtgtcctat
aagcgctccatcccccgcagcgcctacggcggcctgggctcggcgctgctcagctcggcc
gagagcagcctggacttcagccagtcctcgtcgctcctgaacgggacgggcgcgggcatg
ggcgtcgacttcaagctggtgcgcgccaacgagaaggagcagctgcagggtctcaacgac
cgcttcgccggctacatcgagaaggtgcactcgctggagcagcagaaccaggagatcgag
gccgagatccaggctctgcgccagaagcaggcgtcccacgcgcaacttggcgatgtctac
gagcaggaactgcgcgagcttcgcgccggcctggagcaggtgaaccacgagaaagcgcag
gtgcagctcgagtcggagcacctggaagaagacatccatcgcctcaaagagcgcttcgat
gaggaggcgcgacttcgcgacgacacggaggctgccgtccgcgcgctgcgcaaggacatc
gaggaggcgtccctggtcaaggtggagctggacaagaaggtgcagtcgctgcaggacgag
gtggccttcctgcgcagcaaccacgaggaggaggtggctgacctgctggcgcagatccag
gcgtcgcacatcacggtggagcgcaaggactacctgaagacggacatcacgtcggcgctc
aaggagatccgctcccagctcgagtgccactcggaccagaacatgcaccaggccgaggag
tggttcaagtgccgctacgccaagctcaccgaggcggccgagcagaataaggaggccatc
cgctccgccaaggaagagatcgccgagtaccgccgccagctgcagtccaagagcatcgag
ctcgagtccgtgcgtgggaccaaggagtccctggagagacagctcagtgacatcgaggag
cgccacaatcacgatctgagcagctaccaggacacgattcatcagttggaaaatgagctc
cggggaacaaagtgggagatggcacgtcatttgcgggaataccaggatctcctcaatgtc
aagatggccctggatattgagattgcagcatacagaaaattgttagaaggcgaggagacc
aggttcagtacgttttccggcagcatcactggccctttctacacacacagacagccttcc
gtcacaatatccagtaaaatacagaaaacaaaagtagaggcccccaagctgaaggttcaa
cacaaatttgtagaggagatcatagaagagaccaaggtggaagatgaaaagtcagagatg
gaagatgccctggcagctattgaagcagaattggcttctagtgccatgaaggaggaagag
gaaaaggaggaagaagaagcagctgaagaggaagaaattgttgccaccaaaaaggctgct
gtggaggctgctgctccagaagctgaggaaggtgaggaagaaggtgagaaagaagaaggg
gaagaggaggcagaagaggaggaagaagaagatgagggtgctaagtcagaccaagccgag
gaaggaggatctgaaaaggaaggatccagtgaaaaagatgagggtgaacaagaagaagga
gaaactgaagctgagggtgaagaactggaggctaaggaggaaaaaacagaagtgaagact
aaggaaaaagtcgtcatcaaggagcttgttgtagaatctacatcagtgaaaacggaaaaa
gccaagtctcctgtggccctgtcacccccagcaaagtcacccatagcaaagtctcctgca
gctctgtctcccccagcaaaatcccccacagcaaagtcccctgcggctctgtcaccccca
gaaaagtcaccaacggcaaagtcccctgcggctctgtcccctacagccaaatctcccatg
ccaaagtctcccatgccaaaatcaccaatgccaaaatctcctgtggaggaagtgaaagct
aaagcagaggaagataaggaagaagctgcagtagctgcaggagaaaaggaatcccccaaa
gaagagaaaaaggaagaacgtgcaaaagaagtccctgaaaagaaaaaagctgactcccct
gtcaaagaaacagtcgtggaagaggtggacactgtcaccaaatccgctaaggttggttct
gagaaagaggttgaagaggaggagggagggagtgaggaaggaagtgaccagggttcaaag
ggatccacaaaggaagacatagcaatcaatggggaagtagaaggcaaagaggaggaggag
gaggaacaggaaaccaaagaaaaaggtagcgggagagaagaggagaaaggggtggtcacc
aatgggcttgacttgagcccagcagaggaaaagaaagagggagacaagagtgaagagaaa
gtcgtggtgaccaaaaagatagagaaaatcaccagtgaaggtggggatggagctaccaaa
tacatcaccaaatctgtcaccgtgacccaaaaggtagaggagcatgaagaaacctttgag
gagaagctagtgtccacaaaaaaggtagagaaggtcacctctcatgctatagtcaaagaa
gtcacccagagcgattag
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