Antechinus flavipes (yellow-footed antechinus): 127547429
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Entry
127547429 CDS
T08818
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03013
Nucleocytoplasmic transport
afz03015
mRNA surveillance pathway
afz03040
Spliceosome
afz05014
Amyotrophic lateral sclerosis
afz05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127547429
09122 Translation
03013 Nucleocytoplasmic transport
127547429
03015 mRNA surveillance pathway
127547429
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127547429
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127547429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127547429
03041 Spliceosome [BR:
afz03041
]
127547429
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127547429
TREX complex
127547429
Spliceosome [BR:
afz03041
]
Complex C
Other components
EJC/TREX
127547429
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127547429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLV_coat
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
127547429
NCBI-ProteinID:
XP_051830306
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All DBs
Position
1:complement(576660663..576662061)
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AA seq
437 aa
AA seq
DB search
MANKMDMSLDDIIKLHRSQRDGCGGDRDRDRGRAGAQGGRDSGDAQGAARVSRGXGPIRN
RRTMTRRGARGRGRNRPAPYSRPKRLSDKRQPDDVFPSDFGGGPAAETGTKLLISNLDYG
VSDADIQQLFAAFGTLKKAAVHYDRCGGSLGTADVHFERKADALKAMKHYDGVTMNVQLV
LAQTQKQRRAAQSGNRGGMTRSRGSGGGTRRGGPGCKRGPQPGTARNSKQQLSREELDAQ
LDAYNAMIEFEIEDRGSTGAGGSAGLGVAVHSYIRLSNQLIDDVQTLSSAINDLQCQMDS
LVEVVLQNGRGLDFLTAEQGGICLALQERCCFCANKSGIVRDKTRRLQEDWIKGCQELFD
NPLWSGLHGILPSLLPFPGPLIGFLFLWSFGPWAFQKVTSFVKSRIDSALAKPMDIHSHR
LETGDDPLDAHMSNQNF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaagatggacatgtccctggatgatatcattaaactccaccggagccagcgt
gacggatgcggcggggaccgggaccgagaccgaggtcgggctggagcccagggcggccgc
gacagcggggacgcgcagggggcagcccgcgtaagccgaggcnggggccccatccggaat
agacggaccatgacccgcagaggcgcccggggccgcggcagaaaccgacccgcgccgtac
agccgacccaagaggctttcagacaagaggcagcccgatgacgtgttccccagtgacttt
ggaggcgggcccgcagctgagaccgggaccaagttgctgatctccaatttggattacggg
gtctcagatgccgatattcagcaactctttgcagcatttggaactttgaagaaggcagct
gtgcattatgatcggtgcggcggtagtttaggaacagcagatgttcactttgagcgaaaa
gccgatgctctgaaggccatgaaacactatgatggtgtcaccatgaacgtccagcttgtt
ctagcacagactcagaaacaacgaagagccgcacagagtggaaatagaggtggaatgacc
cggagccgtggctctggaggcggcacccggagaggcggccctggatgcaagcgaggaccc
caaccagggactgcaagaaattccaaacaacagctttccagagaagaactagatgcccaa
ctggatgcttataatgccatgattgaattcgaaatagaggaccgtggctccactggagct
ggaggctcagcaggactaggagtggctgtccattcctacattagactttcaaaccaactg
attgacgatgttcagaccctctccagtgctatcaatgatctccagtgtcagatggatagt
ttagttgaagtggtcttgcaaaacggacgaggcctggatttcctcactgccgagcaagga
gggatatgcttagccctccaggaacgctgttgcttctgtgcaaacaaatctggtattgta
agggacaaaactaggagactccaggaagattggattaaggggtgccaagaactgttcgat
aaccctctttggagtgggctccatgggatcctcccttctcttcttcctttccctgggccc
ttaattggctttcttttcctttggtcttttggaccctgggccttccagaaagttacatcc
tttgtcaaatcccgaatagatagtgcactggcaaaacccatggacatacactctcaccgc
cttgagactggtgatgacccccttgatgctcatatgagcaaccaaaatttctga
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