KEGG   Antechinus flavipes (yellow-footed antechinus): 127547441
Entry
127547441         CDS       T08818                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03013  Nucleocytoplasmic transport
afz03015  mRNA surveillance pathway
afz03040  Spliceosome
afz05014  Amyotrophic lateral sclerosis
afz05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:afz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127547441
  09122 Translation
   03013 Nucleocytoplasmic transport
    127547441
   03015 mRNA surveillance pathway
    127547441
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127547441
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    127547441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afz03019]
    127547441
   03041 Spliceosome [BR:afz03041]
    127547441
Messenger RNA biogenesis [BR:afz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     127547441
    TREX complex
     127547441
Spliceosome [BR:afz03041]
 Complex C
  Other components
   EJC/TREX
    127547441
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    127547441
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 127547441
NCBI-ProteinID: XP_051830331
LinkDB
Position
1
AA seq 253 aa
MTDKMDMSLDDIIKLNRSQRGGCGGDRDRDRGRAGAQGGRDGGDAQEAARLSRGGGPIRN
RRTMARGDARGSRRNRPAPYSRPKRLPHKRRPDDVFPSDFGGGLALETGTKLLISNLDFG
VSDADIQQLFAAFGTLKKAAVHYDRSGGSLGTADVHFERKADALKAMKHYDGVTMNVQLV
LAQTRKQRRAARRVNRGGMTRTRGSGGGTRRGGPGRKRGPQAGAGRNSKQQLSREELDAQ
LDAYKAMIEFELN
NT seq 762 nt   +upstreamnt  +downstreamnt
atgaccgacaagatggacatgtccctggacgacatcattaaactcaacaggagccagcgt
ggcggatgcggcggggaccgggaccgagaccgaggtcgggctggagcccagggcggccgc
gacggcggagacgcgcaggaggcagcccgcttaagccgaggcgggggccccatccggaac
agacggaccatggcccgcggagacgcccggggcagccgcaggaaccgacccgcgccctac
agccgacccaagaggcttccacacaagaggcggcccgatgacgtgttccccagtgacttt
ggaggcgggctcgcacttgaaaccgggaccaagttgctgatctccaatctggatttcggg
gtctcggatgccgacattcagcaactctttgctgcatttggaactctgaagaaggcagct
gtgcattatgatcggtccggcggaagcttaggaacagcagatgttcactttgagcgaaaa
gccgatgctctgaaggccatgaaacactatgatggtgtcaccatgaacgtccagcttgtt
ctagcacagactcggaaacaacgaagggccgcccggagggtaaatagaggtggaatgacc
cgaacccgtggctctggaggcggcacccggagaggcggccctggacgcaagcgaggacca
caagcaggggctggaagaaattccaaacaacagctttccagagaagaactagatgcccaa
ctggatgcttataaagccatgattgaattcgagttaaactag

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