Antechinus flavipes (yellow-footed antechinus): 127547660
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Entry
127547660 CDS
T08818
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127547660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afz03021
]
127547660
03041 Spliceosome [BR:
afz03041
]
127547660
03036 Chromosome and associated proteins [BR:
afz03036
]
127547660
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127547660
Spliceosome [BR:
afz03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
127547660
Complex B
127547660
Complex C
U2 SnRNP specific factors
127547660
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
127547660
TFTC complex
127547660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
127547660
NCBI-ProteinID:
XP_051830581
LinkDB
All DBs
Position
2:complement(42120365..42154450)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacttgaccttgcagcgagccactggtatcagctttgctattcatggc
aacttctcaggaaccaaacaacaggagattgttgtttctcgagggaagattttggagctg
ctccgccctgaccccaacactgggaaggtacatacccttttgactgtggaagtgtttggc
gttatcagatccctcatggccttcaggttgacaggtggtacaaaagactacattgtggtt
ggcagtgactcaggccgaattgtcatcctggagtatcagccatccaagaacatgtttgag
aagatccatcaggaaacctttggcaaaagtgggtgccgccgaattgtgcctggacaattc
ttagctgttgatcccaaaggcagagctgtcatgattagtgctattgaaaagcagaaattg
gtttacattctcaacagagatgctgctgctcggcttaccatttcctcccctttggaagcc
cacaaagcaaatactttggtttatcatgtggtgggagtagatgtcggatttgaaaatccc
atgtttgcttgtctggagatggattatgaggaagcagacaatgatccaacaggagaagca
gccgccaatacccaacagacactcactttctatgagttggatttagggttaaaccatgtg
gtccgaaaatatagtgagcctttggaggagcatggcaatttcctcatcacagtgccagga
ggctcagatggtccaagtggtgtattgatctgttccgaaaactacatcacctataagaac
tttggtgatcagcctgatatcagatgtcccattcctaggaggcggaatgatttggatgac
cctgagagaggaatgatttttgtctgctctgccacccataagaccaagtctatgttcttc
tttttggcacaaactgagcaaggagacattttcaaaatcactttggagacagatgaagac
atggttactgaaatccggctgaagtattttgatactgtccctgtggcagctgctatgtgt
gtgctcaaaacaggcttcctctttgtggcatcagaatttggaaatcattacctgtatcag
attgcccaccttggtgatgatgatgaagaacctgagttctcatctgccatgcccttagaa
gaaggagacacattcttcttccagcctcggcctctcaaaaatttagtgttggtggatgaa
ctggatagtctctcccctattctgttttgtcagattgctgatctggccaatgaagatacc
ccacagctgtatgtagcttgtggcaggggaccacgatcttctctgagggttttgaggcat
ggacttgaggtgtcagaaatggctgtctctgagctgcccggtaatcccaatgctgtctgg
actgtccgccggcacattgaagatgaattcgatgcttacatcattgtgtctttcgtgaac
gccaccctggtcctttctatcggagagactgtggaagaagtgacagactcgggcttcctg
ggcaccactcctaccctgtcctgttccttgttaggggacgatgctttggtgcaggtatat
ccggatggcatccggcatatccgagcagataagagagtaaatgaatggaagaccccagga
aagaaaactattgtgaagtgtgctgtaaaccagcggcaggtggtgattgccctgacagga
ggagaattggtctacttcgagatggacccttcaggacagctgaatgagtatactgagcga
aaggagatgtctgcagatgtagtatgtatgagtttggcgaatgtgcctcctggggagcaa
cgctctcgtttcctggctgtgggactggtagacaacactgttcgaatcatctctttggac
ccttcggattgcctccagcctctgagcatgcaggccctcccagctcagccagaatcactg
tgtattgtcgagatgggtggagctgagaagcaagatgagctgggggaaaggggctccatt
ggcttcctctatctaaacattgggctgcagaatggtgtgcttttaaggactgttctagac
cctgtcactggtgatctgtctgacacccgtacaagatatttgggttctcgccccgtgaag
cttttccgagtgcggatgcagggccaggaagcagttttggctatgtcgagtcgctcgtgg
ctaagttattcttaccagtcccgctttcatctgacccccctgtcctatgagactttggag
tttgcatcaggctttgcatctgagcagtgtcctgagggcattgtggccatctctaccaat
actttaaggattttggctttagagaagctcggtgctgtcttcaaccaggtagctttccct
ttgcagtacactccaagaaagtttgttatccaccctgagagcaacaaccttatcatcatt
gagaccgatcacaacgcctatactgaggccacaaaagcacagaggaaacagcagatggca
gaggaaatggtagaagcagctggggaagatgagagagaattggcagctgagatggctgct
gccttcctgaatgaaaatctcccagaatccatctttggagcacccaaagcaggcaatgga
cagtgggcttctgtggtccgggtaatgaatcccatacaaggaaacacactggatcttgtc
cagctggaacagaatgaggccgcttttagtgtggcagtatgccggttctcgaatactggt
gatgattggtatgtgctggtgggggtagccaaagacctcattctgaacccccgatccgtg
gctggaggctttgtctatacctataaacttgtgaacagtggagagaaactggagtttttg
cacaagacaccagtggaagaggtccctgcagccattgccccattccagggcagagtattg
attggtgtgggaaagctgttgcgggtctatgacctaggaaaaaagaagttactgcgaaaa
tgtgagaataagcacattgcaaattacatctcgggtatccagactatcggacatcgggtt
atcgtgtctgacgtccaggagagtttcatctgggtcagatacaagcgcaacgaaaaccag
ctcatcatctttgccgacgacacctatccccgttgggtcacgacggccagcctcctggac
tatgacaccgtagctggggctgacaagttcggcaacatttgtgtagtgagactcccaccc
aacaccaacgatgaagtggatgaagacccgacaggaaacaaggccctgtgggaccgagga
cttctcaatggagcctcccaaaaggcagaagtaatcatgaattaccatgttggggagaca
gtgctttccttacagaagaccacgctgattccaggaggctcagaatctcttgtctatacc
accttgtcaggtgggattgggatccttgtgcctttcacatcccatgaggatcatgacttc
ttccaacatgtggagatgcacctgcggtctgagcatcctcctctctgtggaagggaccat
ctcagcttccgctcttattacttccctgtgaagaatgtgattgatggtgacctttgtgaa
caattcaattcaatggagcccaacaaacagaagaatgtgtcagaagaattggataggaca
ccgccggaggtctcaaagaagctggaagacatccgtacccgctacgccttctga
DBGET
integrated database retrieval system
