Antechinus flavipes (yellow-footed antechinus): 127547881
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Entry
127547881 CDS
T08818
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127547881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127547881
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127547881
mRNA degradation factors
5'-3' decay
Decapping complex
127547881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
Beta-prop_EDC4L
WD40
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
WDR55
Motif
Other DBs
NCBI-GeneID:
127547881
NCBI-ProteinID:
XP_051830928
LinkDB
All DBs
Position
2:complement(60261253..60279334)
Genome browser
AA seq
1398 aa
AA seq
DB search
MASSCTSIDIEDATQHLRDILKLDRPPGGSGTESQRTSSSYNGDLNGLLVPDPLSSGDGT
VLSKPSHRTAPLANLEEKQVICLSGDDSSTCIGISAKEVEIVASSDSNILSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRGASNGSAMVRVISVSTAERTLLKGFTGSV
ADLAFAHLNSPQLACLDESGSLFVWRLAMENNKIQEEIVVNIKRSEGTPLNHFRRIIWCP
YIPEENEESSEEGSQTLALLHEDRAEVWDLDILRANNSSWPVDVSHIKEGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKK
QDPDSSLFRRVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFCPDMYPVSVPPSLKACL
DLSAEYLILSDVQRKVLYVMELLQNQEEGRAYFSSISEFLLTHPVLSFGIQVVSRCRLRH
TEVLPAEEEGDSLSTEGSHGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPQQSPDVVAP
LPSHSAREDFGFGEHLPELNSESLASGQGSGQGSQADLRRIADLPVPSDFLSLTNEAKPK
LMTPDAFMTPSVSLQQITVSPGSSGSSLTAVTSLNTTSATDTAMPRSSEELTLSPKLQLD
SSLTLSSSSSSLQASPRGHSVLIPGLSDKLTTKGPSQVPQGNPSLSLELQEVEPLVVPQA
SPTRARSPDVISSASTALSQDIPEIASEALPRGFGTAAPEGLEPDSMASAASALHLLSPR
PRPGPEHGPQHSLDGSPGEGEKRSTPSLLETALSQETSAADSKAWPAAPDITRETRNSLA
DSPRDDVQEKHKASSYHRHAYHLLQQDSQDASAEQSDHDDEVASLASTSAGFVAKATAPR
LPVKDWKTKGSPRASPKLKRKGKKDDGDLAQGPWLVEHQATEPPEEWLAVVRGQQRELAE
LRQSHAELLQRLTDQLDAVQSSIMGHVERVLESRQEHEQRRLERALAEGQQRSGQLQEHL
SQQLSQALSSAVAGRLERTVREEMKKTIPQCVSKSLEPVTGQLSSTVAAKLTAVEGTLKE
NVTKLVKSKNLTDTIARAAADTLQGPMQAAYREAFQSIVLPTFEKSCQAMFQQINDSFKL
GTQEYLQQLENHMKSRKAREQEAREPVLAQLRGLVGTLQSATEQMAATVSSSVRAEVQHQ
LHIAVSNMQESILSQVQRIIKGEVSLAMKEQQAAVTSSIMQAMRSAAGTPIPAAHLDCQA
QQAHILQMLQQGHVNQAFQQALTAADLNLVLFVCETVDPQQVFGQPPCPLSQPVLLSLIQ
QLSSDLGTRTELKFSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSLSK
SARRLTIMLQGLAVPGLN
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtcctgcaccagcatcgatatcgaagacgccacgcagcatctgcgggacatc
ctgaaactggaccgtccgcccggaggctcaggtacagagagccagcggacatccagctcc
tacaatggagacttaaatggacttctggtgccagatcccctttcttctggtgatggaact
gtactgtccaagccaagtcaccgaacagcaccattggccaacctggaggagaagcaggtc
atctgcctttctggagatgacagctcaacatgcattggaatttcagcaaaagaggtggag
atagtagctagcagtgactccaacatcttaagcaaggctcgggggagcaacaaggtaaaa
atccagccagtggccaagtatgactgggaacaaaaatactattatggcaacctgatcgct
gtgtccaattcattcttggcatatgccatccgaggtgccagcaatggctcagccatggtg
cgggtgatcagcgtcagcacagcagagcgaacattgctaaagggcttcacaggaagtgtg
gccgacttagcctttgctcacctcaactcaccccagctggcttgcctggatgaatcgggc
agcctttttgtgtggcgcctggccatggagaacaacaagatccaagaggaaattgtggtg
aacattaagcgttcagagggcacacctttgaatcacttccgaaggatcatctggtgtcca
tatatcccagaagagaatgaagaaagcagtgaagaaggcagccagactctggccctgcta
catgaagacagggctgaggtatgggacctggacattctccgagccaacaatagttcctgg
cctgtggatgtcagccacatcaaggaaggcttcattgtggttaagggccatagcacgtgc
ctgagtgaaggagctctctcccctgatggaactgttttagccactgcaagtcatgatggc
tttgtcaaattctggcagatctatatcgagggccaagatgaaccacggtgtcttcatgaa
tggaagcctcatgatggcaggcctctctcctgcctccttttttgtgataatcacaagaaa
caagaccctgactcctccttgtttcgcagagtccccttctggaggttcctcatcacagga
gctgaccaaaaccgggaactgaagatgtggtgcacagtgtcctggacctgcttgcaaacc
attcgcttttgtccagacatgtacccagtgagtgtgcctcccagcctcaaggcctgccta
gacctttcagctgaatacctgatcctcagtgatgtgcagagaaaggtgctgtatgtgatg
gagctgctgcagaaccaggaggaaggcagggcctacttcagttccatctccgagttcctg
ctcacccaccccgtgctaagctttggcattcaggttgtgagccgttgccgcctgcggcac
acggaggttctcccagctgaggaggaaggtgacagtttgagcacagagggctcccatggt
gcaggggctgtggagtcagcagcaggtgtacttatcaagctcttctgtgtccacaccaag
gctctgcaggatgtccagatccgtttccagccgcagcagagtcctgacgtggtggctccc
ctcccttcccactcggctcgagaagattttgggtttggagagcacctgccagagctgaac
tcggagagtctggcctccggtcagggttctggccagggctctcaggctgacctcaggcgc
atcgctgacctgcctgtcccttccgactttctcagcctgactaatgaggccaagcccaag
ctcatgacccctgatgccttcatgactccaagcgtctccttgcagcagatcactgtgtcc
ccaggaagcagtgggagttctttaacagctgtgacatccttgaataccacctcggccaca
gacacggccatgcccaggtcatctgaggagctgaccctgagccccaagctgcagctagac
agcagtctgaccctgagcagcagcagtagcagcctgcaggctagtccccgtggccacagc
gtcctcatcccaggcctctctgataaactaacgaccaaagggcccagccaggtcccacaa
gggaacccatcactgtccctggagctgcaggaggtagagcccttggtggtgccacaggcc
tctccgacccgggcccgctcccccgacgtcatctcctcagcctccacagccctgtcccag
gacatccctgagattgcctcagaggcgctgccccgaggattcggcaccgccgctccagag
gggctcgagcctgacagcatggcgtctgctgcctcggccctgcacctgttatctcctcgg
ccccggcctggccccgagcacggcccccagcacagtctggatgggagtcctggggaggga
gagaagcggagcaccccttctctgctggagacggcgctgagccaggagactagtgctgct
gacagcaaggcctggcctgctgcacctgacatcacccgggaaacccgcaatagcctggct
gacagtcccagggatgatgttcaggagaagcacaaggcctcttcctaccaccggcacgcc
taccatctgctgcaacaggacagtcaggatgccagtgctgagcagagtgaccatgatgac
gaggtggccagcttggcctcgacctcagctggctttgttgccaaagcaacagccccgcga
ctgccagtgaaggactggaaaaccaagggatctccccgggcctcccccaagctgaagagg
aaaggcaagaaggatgatggggacctggcgcaaggcccctggctggtagaacaccaggca
acagaacctcctgaagagtggttggccgtggttcgggggcagcagcgggagcttgctgag
ctgcggcagagtcacgccgagttgctgcagcggctaacggaccagctggatgcggtgcag
agttctatcatgggccacgtggagagggtcctggagtctcgacaagaacacgagcagaga
cggttagagcgggccctggctgaggggcagcagcgtagcgggcagctgcaggagcatttg
tcacagcagttgtcccaggccctgtcctcggctgtggcaggccggctggagcgcacagtt
agagaagagatgaagaagaccattccccagtgtgtctccaaaagcttggagccagtgaca
ggccagctgagtagcaccgtggccgccaagctgaccgcggtagaaggcaccctcaaggag
aatgtcaccaagctggtcaagtccaagaatctgactgacacaatcgcccgcgcagctgca
gacacactacagggacccatgcaggctgcctaccgtgaggccttccagagcattgtgctg
cccacttttgagaagagctgtcaggccatgttccagcagatcaacgacagcttcaagctg
ggtacccaagaatatctgcagcagttagagaaccacatgaagagtcggaaggcgagagaa
caggaagcccgcgagccagtgctggctcagcttcgaggcctggtgggcaccttgcagagt
gccacagaacagatggcagccaccgtgagcagcagtgtgcgggccgaggtccagcaccag
ctccacattgctgtgagcaatatgcaggagtcgatcctttcccaagttcagcgcattatc
aagggggaggtgagcctggccatgaaggagcaacaggcagcagtcacttccagcatcatg
caggcgatgcgctctgctgctggcacacctatcccagcggcccaccttgactgccaggcc
cagcaggcacacatcctgcagatgctccagcagggccatgtcaaccaagctttccaacag
gctctgacagcagctgacctgaacctggtgctctttgtgtgtgagactgtggacccccag
caggtgtttggccagccaccttgtcccctgtcccagcctgtcctgctttccctcattcag
cagctttcctctgacctgggaacccgcacagagctcaaattcagctacttggaggaagct
gtgatgcacttggaccacagcgaccccatcaccagggaccatatgggctcagtcatggcc
caggtgcggcagaagctgttccagttcctacaggctgaacctcacaactccctcagcaag
tctgcccggcgtctcaccatcatgcttcaggggctggctgtccctgggctcaactag
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integrated database retrieval system
