KEGG   Antechinus flavipes (yellow-footed antechinus): 127548059
Entry
127548059         CDS       T08818                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz01524  Platinum drug resistance
afz03430  Mismatch repair
afz05200  Pathways in cancer
afz05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:afz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    127548059
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    127548059
  09162 Cancer: specific types
   05210 Colorectal cancer
    127548059
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    127548059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afz03400]
    127548059
DNA repair and recombination proteins [BR:afz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     127548059
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV MutS_I AAA_27 YidB
Other DBs
NCBI-GeneID: 127548059
NCBI-ProteinID: XP_051831184
LinkDB
Position
2:93401472..93462452
AA seq 934 aa
MAVQPKEALVMDSXAECSFVRFFQSMPAKPLTTVRIFDRGDYYTAHGDDALLAAREVFKT
QAVIKYIGVTGSKKLESVVLSKMNFESFAKDLLLVRQYRVEVYKNKAGSKATKENDWHVA
FKASPGNLSQFEEVLFGSSDMSCSIGGVGVKLSIVDGQRLVGVGYVDSIQRKLGLCEFPD
NDQFSNLESLLIQIGPKECVLPGGETAGDMGKLRQVIERGGILITERKKTDFSAKDIIQD
LNRLLKSKKGDQVNSAVLPEMENQVAVSSLSAVIKYLELLSDDTNFGQFELTTFDLSQYM
KLDNAAVRALNLFQGSAEDKSGTQSLAALLNKCKTPQGQRLLNQWIKQPLLDKNRIEERL
NLVEAFVVDAELRQSLQEDLLRRFPDLNRFAKKFQRHAASLQDCYRIYQAINQLPNVIQA
LEKHEGKHHSLLLAIFVTPLTDLHSDFSKFQEMIETTLDMNQVENHEFLVKASFDPHLTE
LRESITNLEKKMQASLTNAARELGLEPGKHIKLDSNAQLGYYFRVTCKEEKVLRNNKNFN
TLDVQKNGVKFTNSKLAAFNDEYLKIREEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAIVSFAHVSNGAPVPYVRPVILEKGQGKIILKGSRHACVEVQDEVAFIPNDIYFEKN
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEMSIVDCILARVGAGDCQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALADQLPTVNNLHVSALTTDETLTMLYQVKKGVCDQSFGIHVAELANFPKHV
IENAKQKALELEEFQHFGKPQESDDTEPAAKRCYQEKEQGEKIIQAFLNKVKELPFAEMS
EEGIRTKLKRLKAEVIAQNNSFVNEIISRLKVTP
NT seq 2805 nt   +upstreamnt  +downstreamnt
atggcggtgcagccgaaggaagcgctggtcatggacagcncagctgagtgtagcttcgtc
cgtttcttccagtctatgccggcgaagccgctcaccaccgtgcgcatcttcgacaggggc
gattactacaccgcgcacggcgatgacgcgctgttggccgcccgggaagtgttcaagacc
caggcggtcatcaagtatatcggggtgactggttcaaaaaaactggaaagtgttgttctt
agtaaaatgaattttgaatcttttgcaaaagacctcctcttggttcgtcaatatagagtt
gaagtttataagaataaagctgggagtaaggccaccaaggagaatgattggcatgtggca
ttcaaggcttcaccaggcaatctttcccagtttgaagaagttctctttggcagcagtgat
atgtcatgttccattggtggtgtaggtgttaagctgtctattgttgatggccaaagatta
gttggggttgggtatgttgactccatacagaggaaactagggctgtgtgagtttccagac
aatgatcaattctccaatctggaatctctgctgattcagattggcccaaaggaatgtgtg
ctacccggaggtgaaactgctggggacatgggaaaactgagacaggttattgagagagga
ggaattctgatcacagagaggaagaaaactgacttttcagcaaaagatatcattcaagac
ctcaaccgtttgttgaaaagcaaaaagggagatcaagtgaatagtgctgtattgcctgag
atggagaatcaggttgcagtttcatcattgtcagctgttattaagtatttagaactttta
tcagatgatacaaactttggacaatttgaactgactacttttgatctcagtcagtatatg
aagttggataatgcagccgtcagagctcttaacctttttcagggctctgctgaagacaaa
agtggtactcagtctcttgctgccttgttgaataaatgcaaaacacctcaaggccaaaga
ctgcttaatcagtggattaagcagccactactggataagaaccggatagaggaaaggtta
aatctagtggaagcctttgtagtagatgcggagctgagacagagtttacaagaagactta
cttcgacgtttcccagatcttaatcgatttgccaaaaagtttcagagacatgcagccagc
ctacaagattgttaccgaatctatcaagccataaaccagcttcctaatgttatacaagca
ttggaaaaacatgaaggaaaacaccattcattgttgttggcaatcttcgtaacacctttg
actgatcttcattctgatttctccaagtttcaggaaatgatagaaacaaccttagatatg
aaccaggtggaaaaccatgaatttcttgtgaaggcatcctttgatcctcacctgacagag
ttaagagagtcaattactaatctagaaaagaagatgcaggcatctttaacaaatgcagca
agagagctaggcttagaacctggtaaacacattaaactggactccaatgcacaactagga
tattacttccgagtaacctgcaaggaagagaaagtccttcgtaacaataaaaactttaac
acattagatgtccagaagaatggtgtcaagtttaccaacagcaaattggctgccttcaac
gatgagtacctcaaaattagagaagaatatgaggaagcccaggatgccattgttaaagaa
attgtcaacatctcttctggctatgtagaaccaatgcagacattgaatgatgtattagct
caactagatgcaattgttagttttgctcatgtatcaaatggcgcacctgttccatatgta
cgtccagtcattttggaaaagggacaagggaaaatcattttgaagggttccagacatgcc
tgtgttgaagttcaggatgaagttgcatttattcccaatgacatatactttgagaaaaat
aagcagatgttccacattattacaggcccaaatatgggaggtaaatcaacatacattcgc
caaactggagtaatagttctgatggctcagattggctgttttgtgccatgtgagtcagca
gaaatgtccattgtggattgtatcttagcccgagttggagcaggtgattgtcagctgaaa
ggtgtatctacgttcatggcagaaatgctagagacagcttctattctcagatctgcaacc
aaagactccctgataatcatcgatgagttaggaagagggacttctacctatgatggattt
ggattagcatgggctatttcggagtatattgccactaagataggtgccttctgtatgttt
gctactcattttcatgaactgacagcgttggctgaccaattgccaacagtgaataatcta
catgtttcagcattaactactgatgagacattaactatgttatatcaagtaaagaaaggt
gtctgtgatcagagttttgggattcatgttgcagagcttgctaattttcctaaacatgta
atagagaatgccaaacaaaaggcccttgaactagaagaattccagcattttggaaaacct
caagaatctgatgacacagaaccagcagccaagagatgctatcaagaaaaagagcaaggt
gaaaaaataattcaggcatttctgaacaaggtaaaggaattgccctttgcagaaatgtca
gaggaaggtatcagaaccaaactgaaacgactgaaggctgaagtgatagcacaaaataac
agttttgtgaatgaaataatttcacggttaaaagttactccatga

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