Antechinus flavipes (yellow-footed antechinus): 127548195
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Entry
127548195 CDS
T08818
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127548195
03041 Spliceosome [BR:
afz03041
]
127548195
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
127548195
Spliceosome [BR:
afz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127548195
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Nup35_RRM_2
Calcipressin
Motif
Other DBs
NCBI-GeneID:
127548195
NCBI-ProteinID:
XP_051831428
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All DBs
Position
2:122751575..122793455
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AA seq
397 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFYEHRH
AAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEIT
TEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR
TNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG
QIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMLNPVQQQN
QIGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTPPPPPPPPPPQ
TSAPWMGANYGVQPPQGQNGSMLPNQTGYRVAGYETQ
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagatgcccaagaccctgtatgtaggcaacctttcccgagatgtgacagaa
gctctaattctccagctcttcagccagattggaccatgcaaaaactgcaagatgattatg
gatgtaaggacagccggaaatgatccttattgttttgtggagttttatgagcaccgtcat
gcagctgcagcattagctgctatgaatggacggaagataatgggtaaggaagtcaaagtg
aattgggcaacaacccccagcagtcagaagaaagatacaagcagtagtaccgttgtcagc
acactgcgttcacaagatcatttccatgtctttgttggtgatctcagtccagaaattaca
actgaagatataaaagcggcttttgcaccatttggaagaatatcagatgctcgagttgtg
aaagacatggcaacaggaaagtcaaaaggatatggttttgtttccttcttcaacaaatgg
gatgcagaaaatgccatacagcagatgggtggacagtggcttggaggaagacaaatcaga
actaactgggcaacacgaaaacctccagctccaaagagtacttatgaatcaaataccaaa
caactgtcttatgatgatgtggtaaatcagtccagtccaagtaattgcactgtttactgt
gggggtgttacttcaggcctaacagaacaattaatgcgccagactttttcaccatttgga
cagataatggaaattcgagtcttcccagacaaaggatactcatttgtacggttcaattcc
catgagagtgctgcacatgcaattgtttcagttaatggtactacaattgaaggacatgtt
gtgaaatgctattggggcaaagaaactcttgatatgctaaatccagttcaacagcagaat
caaattggatatccacaggcttatggtcagtggggccagtggtatggaaatgcccaacaa
attggccagtacatgcctaatggttggcaagtacctgcatatggaatgtatggacaagca
tggaatcaacagggatttaatcagacacctcctcctccaccaccaccaccaccaccacag
acttctgcaccatggatgggtgcaaattatggagtacagccacctcaagggcagaatgga
agcatgttgcccaatcaaactggatatcgcgtggcaggttatgagactcaatga
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