Antechinus flavipes (yellow-footed antechinus): 127548611
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Entry
127548611 CDS
T08818
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
127548611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afz03021
]
127548611
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
127548611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
127548611
NCBI-ProteinID:
XP_051832048
LinkDB
All DBs
Position
1:complement(701514914..701847736)
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AA seq
1944 aa
AA seq
DB search
MNAAGNWVANGASLEDCHSNLFSLAELTGIKWRRYNFGGHGDCGPIISAPAQDDPILLSF
IRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNLVDVIHHELHIVEEGLWENGLSYECRT
LLFKAIHNLLERCLMDKNFVRIGKWFVRPYEKDEKPVNKSEHLSCAFTFFLHGESNVCTS
VEIAQHQPIYLINEEHLHMAQSSPAPFQVLVSPYGLNGTLTGQAYKMSDPATRKLIEEWQ
YFYPMVLKKKEERKEEEELGYDDDFPVAVEVIVGGVRMVYPSAFVLISQNDIPVSQNVVS
TGGHIAVGQHGVGSMKDPSHCGMPLTPPTSPEQAIIGESGGPPSAIGHLAAQEGMATMHS
PKRSGEIPPKLHSHMVHRVWKECILNRTQLKRSQVSAPHLEEEASSESPPPPSWGFVDPA
QRASCSCSRHKLFKQRCAVGPSRPTSISQPGFAVGPPSSSSLPPPASSKHKTTERQEKGD
KLQKRPVMPFHHRPSVGEELCMEQDAPGQKLALAGVDASLEVPSSRKYDKQLAVPSRNTS
KQMHLNPMDSPHSPISPLPPTLSPQPRGQEAESLDPPSIPVNPALYSNGLELQPLSNLDD
RTVLVGQRLPLMAEVSETALYCGIVPSNYESSDKWHSYHLPPSDDLEFRPPELQGEQYDV
KMEINSDSTALKRLLAQPHKRFKIWDDKQPQGQAVYLDPSPRMQQPAETLGDASDPYTFE
DGDIKYSFTVNKKCKFGMERELLKKNKSEDGFGSKEIPTTGHSTPVPDGKDAMSIFSSAP
KTDVRQESAASRAGPSSLTQVTDLAPSLHDLDNIFDNSDEDDLGAASPALRSSKIPTVGT
EDRPLGKDGRMAVPYPPTFQQYGTWMVRMLCVWRREAVPVAWVGTGLGEVIEDEVDIFGK
NSDLAQAAERRLMMCQTAFLPQMEGARKPQEPPVSLLLLLQNQHTQPFTALSCLGYISPS
HRYSVPGTHWSYDRVQADHNDSWTECVNALEQGRQYVDNPTGGRVDEALVRSATVHAWPH
SNVLDISMLSSQDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRG
TYGSEESPEPLPIPTVLVGYDKDYLTISPFSLPFWERLSLDPYGGHRDVAYIVVCPENEA
LLEGAKTFFRDLSAVYEMCRLGQHKPISRGLRDGIMRVGKTVTPKLTDELMSEWFSQPWS
SEDSDNHSRLRLYAQVCRHHLAPYLATLQLDSSLLVPPKYPASAPVAAAVAAAAAAAAAA
AAAAAAAAAAAAQAQTAPGSVGPSASNPGCASGPGAPPAGTSNGSSGSTSAAAGSSGPPA
SSASSGPGVTPGSVTSSSGFGGGGGTGQTPSAGTSMADRAPGSLGPGGEAEPGQNSSQQP
PPEGQDSVTERERIGIPTEPESADSQAYPPAVVIYMVDPFTYTAEEESTPANFWLLGLMR
CYTDMLDNLPENMRNSFILQIVPCQYMLQTMKDEQFFYIQHLKSMAFSVYCQCRRPLPTQ
IHIKSLTGFGPAASIETTLKNPERPSPIELYSPPFVLAPVKDKQTELGETFGEASQKYNV
LFVGYCLSHDQRWLLASCTDLQGELLETCIVNIDLPNRSRRSKVSPRKIGLQKLWEWCIG
IVQMTSVPWRVVIGRLGRLGHGELKDWSILLGECSLQTISKQLKEACRMCGLSAADSPSI
LSACLVAMEPQGAFVVMPDAVTMGSVFGRSTALNLQSSQLNTPQDATCTHILVFPTSSTI
QVAPANYPNEDGFSPNNDDMFDLPFPDDMDNDIRILITGNLHSSPNSSPVPSPGSPSGMG
VGSHFQHSRSQGERLLSREAPEELKQQPLALGYFVSTAKAENLPQWFWSSCPQAQNQCPL
FLKASLHHHISVAQMDELLPARNSQRVPHPLDSKTTSDVLRFVLEQYNALSWLTCNPATQ
DRTSCLPVHFVVLTQLYNAIMNIL
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcggcagggaactgggtggcgaacggggcgagcctcgaggactgccactccaat
ctcttctcgctggctgaactcactggaatcaaatggcgtagatacaattttggagggcac
ggcgactgtgggcccatcatttcagcccctgcccaggatgatccaatcctgttaagtttc
attcgctgcctgcaagccaatctactgtgtgtatggcgccgtgatgtcaaaccagattgc
aaagaattatggatattctggtggggagatgaaccaaacttagttgatgtgatacatcat
gaattacacatagtggaggaaggactatgggagaatggcctttcctatgaatgtaggacc
ctgctcttcaaagcaatccacaacttattagaaaggtgcctaatggataaaaactttgtc
aggattggtaaatggtttgttcgaccctatgaaaaagatgagaagccagtcaacaaaagt
gaacatttgtcctgtgccttcacattttttcttcatggggaaagtaacgtatgcacaagt
gtggagattgctcagcaccagccaatctatctgattaatgaagagcatctacatatggct
cagtcgtcccctgcaccatttcaagtgctggtgagcccctatggcttaaatgggacactg
accggccaggcatataagatgtcggatccagctacccgcaagctaatcgaggaatggcag
tatttctacccaatggtgctgaagaagaaagaggagcggaaggaggaagaggagttggga
tatgatgatgatttccctgtggcggttgaagtaattgttggcggtgttcgcatggtgtat
ccatcagcctttgttttgatctctcaaaatgacatcccggtgtctcagaatgttgtcagc
actggaggtcacattgctgttggccagcatggagttggaagcatgaaagaccctagccat
tgtggaatgccgctcaccccacccacctctccagaacaagcaatcataggtgaaagtgga
ggtcctccaagtgccattggtcacttagctgcccaggagggaatggctactatgcacagt
ccaaagagatcgggggagattcctccaaaactccacagtcacatggtccacagagtctgg
aaggaatgcatcctcaacagaacacaactcaagaggagtcaagtctctgctccacactta
gaggaagaagcctctagtgagtctcctcctccaccttcttggggttttgtggatcctgcc
caaagagccagctgttcctgttccaggcataagcttttcaaacagcgctgtgcagttggg
cccagccggcccacttcgatatcacaacctgggttcgctgttggcccaccatcttcttca
tctttgccgcctccagcctcttctaagcacaaaacaacagaacgacaagaaaaaggagac
aaacttcaaaagcggcccgtgatgccctttcaccacaggccctctgtgggtgaagagtta
tgcatggagcaggacgcgccagggcagaagctggccttggctggggtggatgcctccttg
gaggtcccaagcagcaggaagtatgataagcagctggctgtgccttccagaaacacaagc
aaacaaatgcatctgaatcccatggattcaccccattcccccatttcccctctgcctcca
accctcagcccccaaccaagagggcaagaagcagagagtttggacccaccgtccattcct
gtgaatccagctctctatagtaatggactagaacttcagccgttatcaaacctggatgac
aggactgttcttgtgggccagagattgcctctgatggccgaggtcagtgagacagccttg
tactgcgggattgtgccctccaattatgaatcatctgataaatggcacagttaccaccta
ccaccaagtgatgacctagagttcaggcctccagagctccagggtgagcaatatgatgtc
aagatggagataaattcagacagcactgcactgaaaagactcttagcacaacctcacaaa
cggtttaaaatctgggatgataagcagcctcagggacaggcagtctaccttgacccatca
cctcgaatgcagcagcctgcagagaccctgggcgatgccagtgacccatacacctttgag
gatggtgacatcaagtacagtttcactgtcaacaaaaaatgcaaattcggaatggagaga
gagctactgaaaaagaataagtctgaagatggatttggttcaaaagagatccccacaaca
ggtcattccacaccagtgcccgatgggaaggatgccatgtctattttcagttctgctcca
aaaacagatgtccgtcaggaaagtgctgccagcagagcaggccccagcagccttacccag
gtgactgatctggccccttcactccatgacttggacaacatctttgataattctgatgag
gatgaccttggggctgcatcaccagcactacgttcatcaaaaatcccaacagtaggaacc
gaagaccgacctctggggaaagacggcagaatggcagttccttatccaccaaccttccag
cagtatggcacttggatggtgaggatgctctgtgtgtggagaagagaggcagtgccagtt
gcctgggtgggcacaggactgggtgaagtcattgaggatgaagtggacatttttgggaag
aactcggacctcgcccaggcagccgagcggcggctgatgatgtgtcagactgccttcctc
cctcagatggagggggccaggaagccccaggagccccctgtcagcctcctcctcctcctc
cagaaccaacacacgcagcccttcacagccctgagctgcctgggctacatctcccccagt
caccgctactccgtccccgggacacactggagttatgacagggtgcaagcagaccacaac
gactcgtggacggagtgcgtcaacgcgctggagcagggccggcagtacgtcgacaacccg
actggcgggagagtggacgaggccctcgtccgaagtgccaccgtccacgcctggccccac
agcaacgtgctggacatcagcatgctctcctcccaggacgtggtgcgcatgctactctcc
ctgcagccctttctccaggatgccattcagaagaagaggacaggccggacctgggagaac
atccagcacgtgcagggacccctgacctggcagcagttccacaagatggccggacgcggc
acctacggctcagaagagtccccggagcctttgcccatccctacggtgctggtgggctat
gacaaggactatctcaccatctcaccgttctccttgccattctgggagaggctgtcgtta
gatccctacgggggccaccgggatgtcgcctacattgtggtgtgtccagaaaatgaggcc
ttgctcgaaggagccaaaactttcttcagggacttgagtgctgtgtatgagatgtgtagg
ctggggcagcacaagcccatcagcagagggcttcgggatgggatcatgcgcgtggggaag
acagtgaccccgaagctgacggacgagctcatgagtgagtggtttagccagccctggagc
agcgaggacagcgacaatcattccagactcagactttatgcacaggtctgccgccaccac
ctcgcaccttatttagctactctgcagctggacagcagcctactggttccacctaagtac
ccagcctcagccccggtagcagcagcagtcgccgctgcagccgccgccgcagccgctgcc
gccgccgccgccgccgcagccgctgcagcagcagcacaggcacaaaccgcccctgggagc
gtgggcccatccgcttcaaatccaggttgtgcttcgggacccggagctccgccagccggc
acctccaatggcagctcaggcagtacttctgcggctgctggttcctcagggccaccagcc
tcctcagcctcctcagggcctggcgtgactccaggcagtgtgacgtcctcttcaggcttt
ggcggcggcggcggcacaggccagacgcccagcgctgggacgagcatggcagacagagcg
ccggggagcctgggccccggaggggaggcagaacctgggcagaactcctcccagcagccc
cccccagaaggacaagacagtgtcacagaaagggagaggatagggattcccacggagccg
gagtcggccgacagccaggcctacccaccagctgtggtcatctacatggtggatcccttt
acctacactgcagaggaggagtccacaccagcaaacttctggctgctcggtctgatgcgc
tgctacacagacatgctggataacttacctgagaatatgagaaactctttcattctccaa
attgtgccttgccagtacatgctgcagacaatgaaggatgaacaatttttctacattcag
cacttgaagtccatggcattttcagtgtactgccaatgcaggcggcctctgcccacccag
atccacattaagtctctcacaggctttggaccggcagccagtattgaaacgaccctcaag
aaccctgagaggcccagtccaatcgagctttattcccctccttttgtattggcaccggtc
aaagacaaacagacggaactgggagagacgtttggagaagccagccagaagtataacgtg
ctcttcgttggctactgcttgtcccatgatcaacgctggctgttagcctcttgcactgac
ctccagggcgaattattggaaacttgcattgtaaatattgatttaccaaacagatctcgg
aggagtaaagtgtctccacgcaaaattgggctccagaagttatgggaatggtgcattgga
attgttcagatgacatcagtgccctggagagtagtgattgggcgccttgggagacttggc
catggggagttaaaagactggagcatcctcctcggcgaatgttccctgcagacaatcagc
aaacagttgaaggaggcttgccgcatgtgtggactctcagccgcagactcaccttccatc
ctcagcgcctgcctggtggccatggagccccagggggcctttgttgtgatgccagacgct
gtcaccatgggctctgtgtttgggcgcagcactgcactgaacctccagtcatctcaactc
aacacacctcaagatgctacttgtacacacatcctggtgttcccaacatcttcgaccatc
caggtggctccagccaactacccaaatgaagatggcttcagccccaacaatgacgacatg
tttgatcttccgttcccagatgatatggacaatgacattaggattttaatcacggggaac
ctgcattcctctccaaactcctccccggttccttccccgggctccccttctggaatggga
gtgggctcgcacttccagcacagtcggagccagggggagcgccttctttcccgagaagcc
cccgaggagctgaagcagcagccccttgctctgggctattttgtgtcaacggccaaagct
gagaatcttccccagtggttctggtcctcttgtccacaagctcagaaccagtgccctctc
ttcctcaaggcttccctgcaccaccacatctccgtagctcagatggacgaacttctccct
gccaggaactcccagcgtgtgccacaccctctggactccaaaaccacatctgacgtccta
aggttcgttctggagcagtacaacgccctgtcctggctcacgtgcaatcccgccacccag
gatcgcacctcctgccttcctgtccactttgtggtgcttactcagttgtacaacgccatc
atgaacatactttaa
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