Antechinus flavipes (yellow-footed antechinus): 127548858
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Entry
127548858 CDS
T08818
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03015
mRNA surveillance pathway
afz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127548858
09123 Folding, sorting and degradation
03018 RNA degradation
127548858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127548858
03041 Spliceosome [BR:
afz03041
]
127548858
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127548858
mRNA cycle factors
Stress granule specific factors
127548858
Spliceosome [BR:
afz03041
]
Complex C
Other components
Complex C specific factors
127548858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
127548858
NCBI-ProteinID:
XP_051832450
LinkDB
All DBs
Position
2:complement(231761482..231798469)
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AA seq
536 aa
AA seq
DB search
MNFEVIKGRPIRIMWSQRDPGLRKSGIGNIFIKNLDDSIDNKALYDTFSTFGNILSCKVV
CDENGSRGFGFVHFETQEAANQAINTMNGMLLNDRKVFVGHFKSRQEREAELGARALEFT
NIYVKNFEEDVDDQCLEELFSQFGKTLSVKVMVDENGHSRGFGFVNFEKHEEAQKAVSGM
NGKALGGRVLYVGRAQKRTERQGELKRRFEQMKQERVNRYQGVNLYVKNLDDVIDDEKLR
KEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRK
EERKAILTNQYMQRISVLRNINGPIFPQPTNYFLPAIPQVTAIFQSPTRASFYSPSTMAP
IRPAPRWTSYSPRSLPTPRRSASNISTVRQASTQVPRAGPHMQRVVNIGTQTMGTGCPGS
PGQAIPQYKYSSAMPNAHQVMERAVHIQGQEPLTASMLASAPPQEQKQMLGDRLYPLIYG
VHAQLAGKITGMLLEIDNSELLLMLESPESLHSKIEEAVAALQAQEVMELPKTYVH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgaggtcatcaaaggcagacccatccgtatcatgtggtcccagcgggatcca
gggcttcggaaatcaggaattggcaacatctttatcaagaacttagatgactccattgac
aacaaggccttgtatgacaccttctctacctttgggaacatcctctcttgtaaggtggta
tgtgatgaaaatggctcccggggatttggctttgtccactttgagacacaagaggctgca
aaccaagcaatcaacactatgaatgggatgctacttaatgaccgcaaagtttttgtgggc
cacttcaagtctcggcaggaacgggaggcagagctgggggcacgagcgctagaattcacc
aacatctatgtcaagaactttgaggaagacgtggatgatcagtgcttggaggaactattc
tcccagtttggaaagactctgagtgtgaaagtgatggtagatgaaaatggccattcccga
ggtttcggttttgttaactttgagaagcatgaggaagctcagaaggctgtgagcggcatg
aatgggaaggcgctcgggggtcgagtcctgtacgttggacgggcccagaaaaggacagag
aggcagggggagctgaagcgtagattcgagcagatgaagcaggagagagtgaaccgctac
cagggtgtgaacctttatgtgaagaatttggatgatgtcattgatgatgagaagctacgg
aaggagttctctccatatggagtgatcaccagtgctaaagtgatgacagagggtggccac
agcaaggggtttggctttgtgtgtttttcctccccagaagaggctacaaaggccgtgaca
gagatgaatggccggattgttagtaccaagcccctctatgtggccctggcccaacgcaag
gaggagcggaaggccattctcactaaccagtacatgcaacgcatttctgtcctaaggaac
ataaatggccccatctttccccaacccaccaattatttcctgcctgctatcccccaagtc
actgcgatcttccagtcacctactagagcatccttctatagtcccagcaccatggccccc
attcggcctgccccaaggtggaccagctattctcctaggtctctgcccaccccccggcgc
tccgcctccaacatcagtactgtccggcaggcctctactcaggtgccccgggcagggccg
cacatgcagagagtggtcaatattgggactcagaccatgggaactgggtgtccaggctcc
ccaggtcaagccatcccacaatacaagtactcctcagctatgcctaatgcacatcaggta
atggagagagctgtgcacatccaagggcaggagcctttaaccgcttctatgttggcctca
gccccacctcaggaacagaagcaaatgcttggtgacagactctatccactcatttatggg
gtacatgctcagctggctggcaagatcactggcatgctgctggaaattgacaattcagag
ctgctgctgatgctggaatctccagaatcgctccattccaagattgaagaagcagtagct
gcactccaagcacaagaagttatggagctgcccaagacatatgtacactga
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