Antechinus flavipes (yellow-footed antechinus): 127549594
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Entry
127549594 CDS
T08818
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03022
Basal transcription factors
afz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127549594
09124 Replication and repair
03420 Nucleotide excision repair
127549594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afz03021
]
127549594
03400 DNA repair and recombination proteins [BR:
afz03400
]
127549594
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127549594
DNA repair and recombination proteins [BR:
afz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127549594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-RING_2
DUF3292
TRAF3_RING
zf-C3HC4_2
DZR_2
zf-P11
zf-UDP
Zn_ribbon_6
DUF1272
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
127549594
NCBI-ProteinID:
XP_051833735
LinkDB
All DBs
Position
2:330872633..331161043
Genome browser
AA seq
309 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVELLFVRGAGNCPECGIPLRKSNFRV
QLFEDPIVDKEVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLDNTKK
KMELYQKENKDVIQKNKLKLTREQEELEEALEVERQENEQRRLFIQKEEQLQQILKRKNK
QALLDELESSDLPAALLLAQHKDRSTQLEMQLEKTKPVKPVTFSTGIKMGQHISLAPIQK
LEEALYEYQPLQIETCGPQVPPLEMLGRLGYLNHVRAASPQDLAGGYTSSLACHRALQDA
FSGLFWPYS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccagggctgccctcggtgtaagaccaccaagtaccggaacccttccctgaag
ctgatggtgaatgtgtgcgggcacacgctatgtgaaagttgtgtggaattactttttgtg
agaggagctggaaattgtcccgaatgtggcatccctctgcggaagagtaacttcagagta
cagttgtttgaagaccctattgttgacaaggaagttgagattaggaaaaaagtgctaaag
atatataacaaaagagaagaagactttcctagtctaagggaatataatgatttcctggaa
gaagttgaagaaattgtttttaacttgaccaataatgtggatttggacaataccaaaaag
aaaatggagctgtaccaaaaggaaaacaaagatgtcattcagaaaaacaagctaaaacta
actagagaacaggaggagttggaagaagctttagaagtggaacgacaagaaaatgaacaa
agacgactgttcatacaaaaggaggaacaactgcagcagattctaaaaagaaagaataag
caggccctcttagatgaactggagagttctgatttgcctgcggctctgcttttagctcaa
cataaggatagatccacacagctggaaatgcaactagagaaaactaaaccagtgaaacca
gtgactttttccacaggcattaaaatgggccagcatatttcattagcccctattcaaaag
ctggaggaagctctatatgaatatcaaccattacagatagagacatgtggaccccaagtt
cctcccttggagatgctaggaaggcttggatatctaaatcatgtccgcgctgcttcacca
caggatcttgctggaggctatacttcatctcttgcatgccaccgagccttacaggatgct
ttcagtggacttttctggccgtacagttaa
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