KEGG   Antechinus flavipes (yellow-footed antechinus): 127549601
Entry
127549601         CDS       T08818                                 
Name
(RefSeq) hypoxia-inducible factor 1-alpha
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04066  HIF-1 signaling pathway
afz04137  Mitophagy - animal
afz04140  Autophagy - animal
afz04148  Efferocytosis
afz04659  Th17 cell differentiation
afz04919  Thyroid hormone signaling pathway
afz05167  Kaposi sarcoma-associated herpesvirus infection
afz05200  Pathways in cancer
afz05205  Proteoglycans in cancer
afz05208  Chemical carcinogenesis - reactive oxygen species
afz05211  Renal cell carcinoma
afz05230  Central carbon metabolism in cancer
afz05231  Choline metabolism in cancer
afz05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:afz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    127549601
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    127549601
   04137 Mitophagy - animal
    127549601
   04148 Efferocytosis
    127549601
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    127549601
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    127549601
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    127549601
   05205 Proteoglycans in cancer
    127549601
   05208 Chemical carcinogenesis - reactive oxygen species
    127549601
   05230 Central carbon metabolism in cancer
    127549601
   05231 Choline metabolism in cancer
    127549601
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    127549601
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    127549601
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    127549601
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:afz03000]
    127549601
Transcription factors [BR:afz03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    127549601
SSDB
Motif
Pfam: bHLH_HIF1A PAS_3 PAS_11 HIF-1a_CTAD PAS HIF-1 PAS_9 PAS_4 HLH
Other DBs
NCBI-GeneID: 127549601
NCBI-ProteinID: XP_051833744
LinkDB
Position
2:332135162..332180290
AA seq 813 aa
MEGGEGANDKKKISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHNVSSHLDKASVM
RLTISYLRMRKLLDAGDLEAEAEMEAQLNCFYLKALDGFVMVLTEDGDMIYMSENVNKCM
GLTQFELTGHSVFDFTHPCDHEELREMLIHRNGPVKKGKEQNTERSFFLRMKCTLTSRGR
TMNIKSATWKVLHCTGHIRVYDTCNNQSQCGYKKPPMTCLILICEPIPHPSNIEVPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIVQHDLIFSLGQTECM
LKPVETVDMKITRLLTKVETEVCSLFDQLKKEPDALTLLAPAAGDTIISLDFDNNEADEQ
QLEVPLYNDVMLPSSSEKLQNINLAMSPLPTTETTKPLRSSADPALNQEVALKLEPNPEP
LELSFTMPQIQDRPASPSDASTRQSSPEPSSSSEYCFDVDNDMANEFKLELVEKLFAEDT
EAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLENTSTNSQSVSTLNIFQQSQT
QEPTTSDEVKTVKIEGTDDNKILIGSPYSVYVINETASAPASPNDENRNRTVSPDRAEKE
VIEQMEKSHPRSPNLLSVALSQRTTAIDEELNPKILALQNSQRKRKMEHEGSLFQAVGIG
SLHHCQDPDDPGTTISLSWKRVKGCKPSEQNGVEQKTVILIPSDLVSRLLGPSLDDSGLP
QLTSYDCEVNVPIQGNRNLLQGEELQRALDQLN
NT seq 2442 nt   +upstreamnt  +downstreamnt
atggagggcggcgagggtgcgaacgacaagaaaaagattagctctgaacgcagaaaggag
aagtctcgagatgcagccagatgtcgtagaagtaaggagtccgaagttttctatgaactt
gcccaccagttgccacttcctcataatgtgagctcacatcttgataaggcttctgtcatg
agacttaccatcagttatttgagaatgagaaaacttctagatgctggtgatctggaagct
gaagctgaaatggaagcacagttaaactgcttttatttgaaagccctagatggttttgtt
atggttctcacagaagatggtgacatgatttatatgtctgaaaatgtgaacaaatgtatg
ggattaactcagtttgaactaactggacacagtgtatttgattttacacatccatgtgac
catgaggaactaagagaaatgcttatacacagaaatggtcctgtgaaaaaaggcaaagaa
caaaacacagaacgtagctttttcctaagaatgaagtgtaccctaactagtcggggacga
actatgaacataaagtctgctacatggaaggtacttcattgtactggtcacattcgtgtg
tatgatacctgcaataaccagtctcagtgtggttataagaaaccacctatgacctgtttg
atattgatttgtgaacccattcctcatccatcaaatattgaagttcctttggatagcaaa
acatttctcagtcgccacagcctggatatgaagttttcatattgtgatgaaagaatcaca
gagctaatgggatatgaaccagaggaacttttaggtcgctcaatttatgaatattaccat
gctttagactcagatcatctaaccaaaacgcatcatgatatgtttactaaaggacaagtc
actacaggacaatatagaatgcttgccaaacgaggtggttatgtctgggttgaaactcaa
gcaactgtgatttacaacactaaaaattcccaaccacagtgtatagtgtgtgtaaattat
gttgtaagtggtattgttcagcacgacttgattttttcccttggacaaacagaatgtatg
ctaaaaccagtggaaacagttgatatgaaaataactcggttattgaccaaggttgaaaca
gaagtatgcagcctttttgatcaacttaagaaagaaccagatgctttaactttattagcc
ccagctgctggagatactatcatatctttggactttgacaataatgaagcagatgagcaa
caacttgaagttccattatacaatgatgtcatgcttccctcatctagtgagaaattacag
aatataaacttggcaatgtccccactacccaccactgaaactacaaaacctctccgtagc
agtgctgaccctgctctcaatcaagaagttgcactgaaattagaaccaaatccagaacca
ctggaactttcttttaccatgcctcaaatacaagatcgtccagctagtccttctgatgca
agcacaagacaaagttcacctgagcctagcagttccagtgaatattgttttgatgtggat
aatgatatggctaacgaattcaagttggaattagtagagaaactttttgcagaagacaca
gaagcaaagaatcctttttctactcaggacactgatttagacttggaaatgttagctcct
tatatcccaatggatgatgactttcagttgcgttcctttgatcaactttcaccattagag
aatacttctacgaattctcagagtgtgagcacccttaacatttttcagcagtctcaaaca
caagaacccactaccagcgatgaagttaaaacagtgaaaatagaaggtacagatgacaat
aaaatattgattggttctccatattctgtttacgtaattaatgaaactgccagtgcccca
gcatcaccaaatgatgagaatcgaaatcggacagtctctcctgacagagcagaaaaagaa
gtaatagaacaaatggagaaatctcatccaagaagtcctaatctgctatctgtcgctttg
agtcaaagaactactgctatagatgaggagcttaatccaaagatattagctttgcagaat
tctcagagaaaaaggaaaatggaacatgaaggttcactttttcaagcagtaggaattgga
tcgttacatcattgccaggatccagatgatcctggaactactatatctctttcttggaaa
cgtgtaaaaggatgcaaacctagtgaacagaatggagtagagcaaaagacagtcatctta
ataccctctgatttagtaagcagactcttgggcccatcattggatgacagtggactacca
caactaaccagttatgattgtgaagttaatgttcctatacaaggaaatagaaacctactg
caaggtgaagaattacagagagctttggatcaacttaactga

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