Antechinus flavipes (yellow-footed antechinus): 127549782
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Entry
127549782 CDS
T08818
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127549782
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127549782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAT_SMAUG
SAM_1
Vts1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
127549782
NCBI-ProteinID:
XP_051834059
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All DBs
Position
2:complement(355417536..355804732)
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AA seq
707 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSRTQARFLQICLEHSLADCTELHILEG
EANNPGIINQWQQESKDKVISLLLIHLPLLKPGNIEAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSGSFSSQNRGRSDSVDYGQTQYYHQR
QNSDDKLNGWQNSRDSGICISASNWQDKNLGCENGHLPLYSSSSVPTTINTIGTSSSSTI
LSGQAHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCIPSDHAPLSPQSSVAS
SGSGGSEHLEDQTTARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQ
LEAQNVTKGARHKIVISIQKLKERQNLLKSLERDILEGGNLRVPLQELHQMILTPIKAFC
SQSSNSEEHSQESEPHHHLTLIGSDNQALECKDSAAGGGIQQHHMSGCEGESAGAPLPEG
DLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQK
LFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTAGSVGGGMGRRNPRQYQIPSRNLPSARL
GLLGTSGFISSTQRSSATNPTILKQGRQNLWFANPGGSNSMPSRTHSSVQRTRSLPVHSS
PQTMLMFQQQEFQVPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgagatcaagtcggagtgctggcaggttggtttaaaggctggaatgaatgt
gaacagactgttgctttgctgtcccttttaaagcgggtgagcaggacacaggctcgattt
cttcagatctgcttggagcattccctggcggactgcactgagcttcacattcttgaagga
gaagccaataaccccggaatcattaaccaatggcaacaggaatccaaggataaagtgatt
tcccttttattaattcacctgcctttgttgaagccaggaaacattgaagcaaaagtggag
tacatgaaactgttgcctaaaatcctggctcactccatcgaacacaaccagcacatagaa
gaaagcaggcaactcctgtcttatgctttgatccacccggccacttcactagaagaccgg
agtgctttagccatgtggttgaatcatttagaggaccgcacatcagggagcttcagcagt
cagaacagaggtcggtctgattctgtggattatgggcagacacagtactatcaccaaaga
caaaactctgatgacaagctcaatggatggcagaactctcgggattctggaatatgcatc
agtgcctccaactggcaggacaaaaacctgggctgtgagaatggccacctacccctctac
tcttcatcttcagtccccaccacaatcaatactattgggactagcagcagcagcacaatt
ctctcaggccaggcacatcacagccctttgaaaagatctgtatcccttaccccacccatg
aatgtgccaaaccagcctctaggacatggatggatgtctcatgaggacttacgagctaga
ggaccccagtgcatcccatctgatcatgcccccctgtctccacaaagcagtgtagcctct
tcaggaagtggtgggagtgaacacttagaagatcagactactgctcgtaacacattccaa
gaagaaggtagtggtatgaaagatgttcctgcctggttaaaaagtctccgtctacacaaa
tatgctgcacttttctctcagatgacctatgaggaaatgatggctctcacagaatgtcaa
ctagaggctcagaatgttaccaaaggcgcaagacacaaaattgtcatcagcatccagaag
ctcaaggagagacagaatctgctaaagtctttagaaagggacatcttagaagggggcaac
ctgcgtgtccctctgcaagaattgcaccagatgatccttactccaataaaagcattttgc
tctcagagctctaattcagaggaacacagccaagagtcagagcctcatcatcatcttact
ctgattggttctgataatcaagcccttgagtgtaaggactctgcagcaggaggtggaatt
cagcagcaccacatgagtggctgtgagggagaatctgcaggggcacctctgcccgaaggc
gatctccctggacagttcacaagagtcatgggaaaagtgtgtacacagctcctggtctct
agacctgatgaggaaaatataagttcctatttacaactcatagacaagtgtctaattcat
gaggcatttacagagacacagaaaaaaagattgttgtcatggaaacagcaggtgcagaag
ctctttcggtctttccctcggaaaacccttctagacatatcaggatatcgacagcaaaga
aatcgaggttttggacaatcaaactccctaccaacagcaggctctgtaggtggtggcatg
ggcaggcggaatcctcgccagtaccagatcccttcaaggaatctcccttcagcccgactt
ggcctcttgggtaccagtgggttcatcagctctacccagcgtagctcagcaaccaaccct
accatcctaaaacaaggaagacagaacctttggtttgccaaccctgggggcagcaacagc
atgccaagtcgaactcacagctctgtccaaaggacccgttccctgcctgttcactcatcc
cctcagactatgttgatgttccaacagcaagagttccaggttccagtgacagaacctgac
atcaacaacaggctagaatccttgtgcctcagtatgactgaacatgcccttggggatggg
gttgatcgaacctccactatctag
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